RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 MPEG1Q2M385 716 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 CCDC80Q76M96 950 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 TSEN54Q7Z6J9 526 aaKnown RBP13.18□□□□□ -0.3
COPS7B-223ENST00000611614 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
COPS7B-223ENST00000611614 OR13H1Q8NG92 308 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 SPPL2AQ8TCT8 520 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 IL17FQ96PD4 163 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
COPS7B-223ENST00000611614 TMEM38AQ9H6F2 299 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 MVB12BQ9H7P6 319 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
COPS7B-223ENST00000611614 PTTG1O95997 202 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 TNFP01375 233 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 EPHA2P29317 976 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ACTR1BP42025 376 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 CASP9P55211 416 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ACTR1AP61163 376 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 RPP38P78345 283 aaKnown RBP13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ILF3Q12906 894 aaKnown RBP eCLIP13.17□□□□□ -0.34e-8■□□□□ 8.8
COPS7B-223ENST00000611614 SCARB2Q14108 478 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ZNF404Q494X3 552 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 TMIGD1Q6UXZ0 262 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 IKBIPQ70UQ0 350 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 VN1R5Q7Z5H4 357 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 KRT78Q8N1N4 520 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 FRMD1Q8N878 549 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ZNF740Q8NDX6 193 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 RAB11FIP5Q9BXF6 653 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 GABARAPL3Q9BY60 117 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 PCBD2Q9H0N5 130 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 PCED1AQ9H1Q7 454 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 DCSTAMPQ9H295 470 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 PRDM8Q9NQV8 689 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 SACM1LQ9NTJ5 587 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 TAS2R9Q9NYW1 312 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 SPATA7Q9P0W8 599 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 PLAGL1Q9UM63 463 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 METTL15A6NJ78 407 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 TNFRSF11BO00300 401 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 ADAMDEC1O15204 470 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
COPS7B-223ENST00000611614 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
COPS7B-223ENST00000611614 THEGLP0DJG4 465 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 PRIM2P49643 509 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 CLK1P49759 484 aaKnown RBP13.17□□□□□ -0.3
COPS7B-223ENST00000611614 IFI44LQ53G44 452 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 TRIM40Q6P9F5 258 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 NFKBIDQ8NI38 313 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 KLHDC7BQ96G42 594 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 C1GALT1Q9NS00 363 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 NDUFAF4Q9P032 175 aa13.17□□□□□ -0.3
COPS7B-223ENST00000611614 A0A1W2PRB8 838 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 OPN1SWP03999 348 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 IL3P08700 152 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 CHI3L1P36222 383 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 TPTEP56180 551 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 ZNF45Q02386 682 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 RPL6Q02878 288 aaKnown RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 DGCR6Q14129 220 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 TCEA2Q15560 299 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 PRSS53Q2L4Q9 553 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 USP43Q70EL4 1123 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 FAM129CQ86XR2 697 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 CCDC71Q8IV32 467 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 CADM4Q8NFZ8 388 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 SMPDL3AQ92484 453 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 IER2Q9BTL4 223 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 TMEM168Q9H0V1 697 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 PLCXD1Q9NUJ7 323 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 CCDC59Q9P031 241 aaKnown RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 ACSL6Q9UKU0 697 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 TESMINQ9Y4I5 508 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 AGAP5A6NIR3 686 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 KRT75O95678 551 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 NDUFS1P28331 727 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 KRT20P35900 424 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 BLKP51451 505 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 CDK6Q00534 326 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 ZNF630Q2M218 657 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 TPRG1LQ5T0D9 272 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 MLIPQ5VWP3 458 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 SLC9B2Q86UD5 537 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 RNF130Q86XS8 419 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 SNX29P2Q8IUI4 249 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 AMER2Q8N7J2 671 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 HRASLS5Q96KN8 279 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 CAMK1GQ96NX5 476 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 NXF2Q9GZY0 626 aaKnown RBP13.16□□□□□ -0.3
COPS7B-223ENST00000611614 AHSPQ9NZD4 102 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 KLHL3Q9UH77 587 aa13.16□□□□□ -0.3
COPS7B-223ENST00000611614 IFT52Q9Y366 437 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms