RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 ADH1CP00326 375 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SRPRAP08240 638 aaKnown RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 IL12RB1P42701 662 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SOX9P48436 509 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 NCBP2P52298 156 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SFSWAPQ12872 951 aaKnown RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 CCBE1Q6UXH8 406 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ERN2Q76MJ5 926 aaKnown RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 KIAA0907Q7Z7F0 614 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 DCUN1D3Q8IWE4 304 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SUSD6Q92537 303 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 PDXPQ96GD0 296 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 LRIG1Q96JA1 1093 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 DPH7Q9BTV6 452 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 TSSK6Q9BXA6 273 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 MS4A8Q9BY19 250 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 FKBP14Q9NWM8 211 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 YARS2Q9Y2Z4 477 aaKnown RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 PCDHGB6Q9Y5F9 930 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ALPK3Q96L96 1907 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 TRBV23OR9-2A0A075B6M9 112 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 EFCAB10A6NFE3 127 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 NDUFS4O43181 175 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 UGT2B17O75795 530 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 CH25HO95992 272 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SLC35G4P0C7Q5 338 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 RPS19P39019 145 aaKnown RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 RAB8AP61006 207 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 CCDC80Q76M96 950 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ZNF557Q8N988 423 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 OR8K5Q8NH50 307 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 GANCQ8TET4 914 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 OTULINQ96BN8 352 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 C16orf58Q96GQ5 468 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 OPALINQ96PE5 141 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-213ENST00000607923 ZNF232Q9UNY5 417 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 IRAK3Q9Y616 596 aa13.04□□□□□ -0.32
CTCFL-213ENST00000607923 E9PQ18 207 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 SLC9A3R1O14745 358 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 DPM1O60762 260 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 CSO75390 466 aaKnown RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 OSMP13725 252 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 DDX6P26196 483 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 MAT2AP31153 395 aaKnown RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 UGT2B10P36537 528 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 LIMS1P48059 325 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 CCR8P51685 355 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 KCNJ8Q15842 424 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 ATAD3BQ5T9A4 648 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 PODNL1Q6PEZ8 512 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 SLC7A5P1Q8MH63 180 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 OR9Q1Q8NGQ5 310 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 OR5P2Q8WZ92 322 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 NEURL3Q96EH8 262 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 WDR34Q96EX3 536 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 TEFMQ96QE5 360 aaKnown RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 TIGARQ9NQ88 270 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 NFKBIL1Q9UBC1 381 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 TMEM221A6NGB7 291 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 PRKYO43930 277 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 MRPS14O60783 128 aaKnown RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 CLEC2LP0C7M8 214 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 ELAVL3Q14576 367 aaKnown RBP13.03□□□□□ -0.32
CTCFL-213ENST00000607923 NDUFAF5Q5TEU4 345 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 KLHDC8AQ8IYD2 350 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 GPR151Q8TDV0 419 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 ARSGQ96EG1 525 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 SLC35G5Q96KT7 338 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 FNDC11Q9BVV2 318 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 EGLN3Q9H6Z9 239 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 SIAEQ9HAT2 523 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 HHATLQ9HCP6 504 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 FZD3Q9NPG1 666 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 INSL6Q9Y581 213 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 KCNE3Q9Y6H6 103 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 F5P12259 2224 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
CTCFL-213ENST00000607923 PDZK1P1A8MUH7 402 aa13.02□□□□□ -0.32
CTCFL-213ENST00000607923 PGRMC2O15173 223 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms