RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 KITP10721 976 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 DDX5P17844 614 aaKnown RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 LBPP18428 481 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 SOX11P35716 441 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 RPL3P39023 403 aaKnown RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 CLCN2P51788 898 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 CEBPEQ15744 281 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 LACTB2Q53H82 288 aaPredicted RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 IL23RQ5VWK5 629 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 ISLR2Q6UXK2 745 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 FAM9CQ8IZT9 166 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 LGI4Q8N135 537 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 SLC5A8Q8N695 610 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 OR1N1Q8NGS0 311 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 OR8K3Q8NH51 312 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 SLC2A12Q8TD20 617 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 BRIX1Q8TDN6 353 aaKnown RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 PPWD1Q96BP3 646 aaKnown RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 CNRIP1Q96F85 164 aaPredicted RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 SENP5Q96HI0 755 aaPredicted RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 FBXL20Q96IG2 436 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 MAELQ96JY0 434 aaKnown RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 REEP4Q9H6H4 257 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 KCNK13Q9HB14 408 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 SLCO1B3Q9NPD5 702 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 MIEF1Q9NQG6 463 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 GIMAP4Q9NUV9 329 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
RNF40-212ENST00000602784 GIMAP2Q9UG22 337 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 BAIAP2L1Q9UHR4 511 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 SPTA1P02549 2419 aa12.94□□□□□ -0.34
RNF40-212ENST00000602784 IGKV3-11P04433 115 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 MPIP34949 423 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 C21orf58P58505 322 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 MAP4K2Q12851 820 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 RAPSNQ13702 412 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 PDE7AQ13946 482 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 LY6DQ14210 128 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 ASB18Q6ZVZ8 466 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 R3HCC1LQ7Z5L2 792 aaKnown RBP12.93□□□□□ -0.34
RNF40-212ENST00000602784 SPATA19Q7Z5L4 167 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 TICAM1Q8IUC6 712 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
RNF40-212ENST00000602784 LIX1Q8N485 282 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 ZNF721Q8TF20 911 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 TM9SF4Q92544 642 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 NCLNQ969V3 563 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
RNF40-212ENST00000602784 ERP27Q96DN0 273 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 PPP1R36Q96LQ0 422 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 TSSK3Q96PN8 268 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 C1orf50Q9BV19 199 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 DEFB126Q9BYW3 111 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 OR8D2Q9GZM6 311 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.93□□□□□ -0.34
RNF40-212ENST00000602784 COPS7AQ9UBW8 275 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 TP53TG5Q9Y2B4 290 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
RNF40-212ENST00000602784 A0A1W2PS29 197 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ZFAND5O76080 213 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 PRPS1L1P21108 318 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 EPHA3P29320 983 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 HPCAL1P37235 193 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 FEN1P39748 380 aaKnown RBP12.92□□□□□ -0.34
RNF40-212ENST00000602784 CLDN8P56748 225 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 FUT7Q11130 342 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 MFAP5Q13361 173 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ACER2Q5QJU3 275 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 CROCCQ5TZA2 2017 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 EPGNQ6UW88 154 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 HSDL2Q6YN16 418 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 DGAT2L6Q6ZPD8 337 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 MAVSQ7Z434 540 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 RPS19BP1Q86WX3 136 aaKnown RBP12.92□□□□□ -0.34
RNF40-212ENST00000602784 GALNT12Q8IXK2 581 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 KIF2BQ8N4N8 673 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 SIRT6Q8N6T7 355 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 OR7G1Q8NGA0 311 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ZNF675Q8TD23 568 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 STON2Q8WXE9 905 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 CTHRC1Q96CG8 243 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 RNF32Q9H0A6 362 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 CCDC134Q9H6E4 229 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 RYDENQ9NUL5 291 aaKnown RBP12.92□□□□□ -0.34
RNF40-212ENST00000602784 PTGFRNQ9P2B2 879 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ATP6V1HQ9UI12 483 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 ZNF223Q9UK11 482 aaPredicted RBP12.92□□□□□ -0.34
RNF40-212ENST00000602784 ENTPD4Q9Y227 616 aa12.92□□□□□ -0.34
RNF40-212ENST00000602784 TRBV11-1A0A0K0K1C0 115 aa12.91□□□□□ -0.34
RNF40-212ENST00000602784 OR6C76A6NM76 312 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms