RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 GRHL3Q8TE85 626 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 C16orf78Q8WTQ4 265 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 KLHL29Q96CT2 875 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 METTL2AQ96IZ6 378 aaKnown RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 PKNOX2Q96KN3 472 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 C5orf34Q96MH7 638 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CNPPD1Q9BV87 410 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 EBPLQ9BY08 206 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 TRIM45Q9H8W5 580 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 MYOTQ9UBF9 498 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 VPS4AQ9UN37 437 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 ERVK-19Q9WJR5 959 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 YARS2Q9Y2Z4 477 aaKnown RBP15.66■□□□□ 0.1
TRIM28-215ENST00000601150 CCL27Q9Y4X3 112 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 PCDHGB6Q9Y5F9 930 aa15.66■□□□□ 0.1
TRIM28-215ENST00000601150 UBR5O95071 2799 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-215ENST00000601150 A0A1W2PS29 197 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 WDR91A4D1P6 747 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 TMEM200CA6NKL6 621 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 NPIPB8E9PQR5 432 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 HRKO00198 91 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 ERAL1O75616 437 aaKnown RBP15.65■□□□□ 0.1
TRIM28-215ENST00000601150 NEURL1O76050 574 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 DHRS4L1P0CG22 281 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 NEFHP12036 1026 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 CSNK2A2P19784 350 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-215ENST00000601150 PRPH2P23942 346 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 HK2P52789 917 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF763Q0D2J5 394 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 MPP2Q14168 576 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 HEPACAMQ14CZ8 416 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 SH2D4BQ5SQS7 431 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 C6orf163Q5TEZ5 329 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF468Q5VIY5 522 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-215ENST00000601150 SPINK14Q6IE38 97 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 FAM180AQ6UWF9 173 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 TMEM156Q8N614 296 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 DOK4Q8TEW6 326 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 BARD1Q99728 777 aaKnown RBP15.65■□□□□ 0.1
TRIM28-215ENST00000601150 TUBB1Q9H4B7 451 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 CXorf21Q9HAI6 301 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 HEY2Q9UBP5 337 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 DNAJC15Q9Y5T4 150 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 PTGDR2Q9Y5Y4 395 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 ZNF780BQ9Y6R6 833 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 TENM4Q6N022 2769 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 NBASA2RRP1 2371 aa15.65■□□□□ 0.1
TRIM28-215ENST00000601150 TMEM233B4DJY2 109 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 SEC22BO75396 215 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 OR2J2O76002 312 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 RASAL1O95294 804 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 SERPINE1P05121 402 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 SP1P08047 785 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 LINC00032P0C843 101 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 NT5EP21589 574 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 ARRB2P32121 409 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 SSR4P51571 173 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 CHI3L2Q15782 390 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 ZNF750Q32MQ0 723 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 NOXRED1Q6NXP6 359 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 RNF111Q6ZNA4 994 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 C16orf47Q6ZP98 133 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-215ENST00000601150 GALNT12Q8IXK2 581 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 DDIASQ8IXT1 998 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 BCORP1Q8N888 145 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 TMEM178AQ8NBL3 297 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 AGR3Q8TD06 166 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 TWIST2Q8WVJ9 160 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 SCMH1Q96GD3 660 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 CLMPQ9H6B4 373 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 LIN28AQ9H9Z2 209 aaKnown RBP15.64■□□□□ 0.09
TRIM28-215ENST00000601150 LRTM1Q9HBL6 345 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 TMBIM4Q9HC24 238 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 KLHL1Q9NR64 748 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 C1orf109Q9NX04 203 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 UTS2RQ9UKP6 389 aa15.64■□□□□ 0.09
TRIM28-215ENST00000601150 POLR3HQ9Y535 204 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-215ENST00000601150 MYO18BQ8IUG5 2567 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 BAHCC1Q9P281 2608 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 OR6C76A6NM76 312 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 TMEM114B3SHH9 223 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 WWP2O00308 870 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 SLC25A12O75746 678 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 HSPA4LO95757 839 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 ATP1B1P05026 303 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 FEN1P39748 380 aaKnown RBP15.63■□□□□ 0.09
TRIM28-215ENST00000601150 NR6A1Q15406 480 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 UGT3A2Q3SY77 523 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 SLC25A25Q6KCM7 469 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 Q6ZSR9 355 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 SLC29A4Q7RTT9 530 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 ZNF227Q86WZ6 799 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 C9orf40Q8IXQ3 194 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 GPALPP1Q8IXQ4 340 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 SAMD14Q8IZD0 417 aaPredicted RBP15.63■□□□□ 0.09
TRIM28-215ENST00000601150 CYP4Z2PQ8N1L4 340 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 OR2T11Q8NH01 316 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 CDC26Q8NHZ8 85 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 NUBPLQ8TB37 319 aa15.63■□□□□ 0.09
TRIM28-215ENST00000601150 FAR1Q8WVX9 515 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms