RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	C4orf22	Q6V702	233 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	RAD9B	Q6WBX8	426 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	ZNF550	Q7Z398	422 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	YRDC	Q86U90	279 aa	Known RBP	10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	OR4N5	Q8IXE1	308 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	SPPL2A	Q8TCT8	520 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	CCT6B	Q92526	530 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	WNT2B	Q93097	391 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	PPWD1	Q96BP3	646 aa	Known RBP	10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	CTHRC1	Q96CG8	243 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	STARD4	Q96DR4	205 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	GAL3ST4	Q96RP7	486 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	TM9SF2	Q99805	663 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	MED18	Q9BUE0	208 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	REG4	Q9BYZ8	158 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	LYRM4	Q9HD34	91 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	YAE1D1	Q9NRH1	226 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	TAS2R13	Q9NYV9	303 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	KCNE2	Q9Y6J6	123 aa		10.03	□□□□□ -0.8
NUP62-222	ENST00000600935	HAX1	O00165	279 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	SNX4	O95219	450 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TGM6	O95932	706 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	ACTL6A	O96019	429 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	ENO2	P09104	434 aa	Predicted RBP	10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	FAM157C	P0CG43	387 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	C1GALT1C1L	P0DN25	315 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	UGT2B10	P36537	528 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	CD79B	P40259	229 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	CASP3	P42574	277 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	RPL21	P46778	160 aa	Known RBP	10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	KCNJ1	P48048	391 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TERF1	P54274	439 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	DIO3	P55073	304 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	SLC37A1	P57057	533 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	RCN2	Q14257	317 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	RPS6KA2	Q15349	733 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	CCNG2	Q16589	344 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	CLEC12B	Q2HXU8	276 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	CHRFAM7A	Q494W8	412 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	HSP90AA5P	Q58FG0	334 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TIGD3	Q6B0B8	471 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TRIM40	Q6P9F5	258 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	VWA1	Q6PCB0	445 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	LMNTD2	Q8IXW0	634 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	SYCE1	Q8N0S2	351 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TTL	Q8NG68	377 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TMEM171	Q8WVE6	324 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TMEM41A	Q96HV5	264 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	F2RL3	Q96RI0	385 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	C19orf24	Q9BVV8	132 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	IARS2	Q9NSE4	1012 aa	Known RBP	10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	TEX10	Q9NXF1	929 aa	Predicted RBP	10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	MAD1L1	Q9Y6D9	718 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	CAPN6	Q9Y6Q1	641 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	PKD1L1	Q8TDX9	2849 aa		10.02	□□□□□ -0.81
NUP62-222	ENST00000600935	LRRC14B	A6NHZ5	514 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	GNB5	O14775	395 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	PLAU	P00749	431 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	THBD	P07204	575 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ATP5A1	P25705	553 aa	Known RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	GSTM2	P28161	218 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	GDF5	P43026	501 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	MAGEA3	P43357	314 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	SLC6A12	P48065	614 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	IL2	P60568	153 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	HERVK_113	P63132	956 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ERVK-8	P63133	956 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	GAB1	Q13480	694 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	VEZF1	Q14119	521 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	C18orf21	Q32NC0	220 aa	Predicted RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	SEL1L2	Q5TEA6	688 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	DNM1P46	Q6ZS02	220 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	GPATCH11	Q8N954	259 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	BBOF1	Q8ND07	529 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	CALML6	Q8TD86	181 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	DGAT2	Q96PD7	388 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ERVK-6	Q9BXR3	956 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	TRIM54	Q9BYV2	358 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ACBD3	Q9H3P7	528 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	CXorf56	Q9H5V9	222 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	NT5DC2	Q9H857	520 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	RYDEN	Q9NUL5	291 aa	Known RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ZNF490	Q9ULM2	529 aa	Predicted RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	ERVK-19	Q9WJR5	959 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	MGAM2	Q2M2H8	2515 aa		10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	YLPM1	P49750	1951 aa	Known RBP	10.01	□□□□□ -0.81
NUP62-222	ENST00000600935	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10	□□□□□ -0.81
NUP62-222	ENST00000600935	MAGEB16	A2A368	324 aa		10	□□□□□ -0.81
NUP62-222	ENST00000600935	SDR42E2	A6NKP2	422 aa		10	□□□□□ -0.81
NUP62-222	ENST00000600935		A8MV72	311 aa	Predicted RBP	10	□□□□□ -0.81
NUP62-222	ENST00000600935		H0Y3Z8	333 aa		10	□□□□□ -0.81
NUP62-222	ENST00000600935	OVOL3	O00110	214 aa		10	□□□□□ -0.81
NUP62-222	ENST00000600935	RTCA	O00442	366 aa	Known RBP	10	□□□□□ -0.81
NUP62-222	ENST00000600935	TP53I11	O14683	189 aa		10	□□□□□ -0.81
NUP62-222	ENST00000600935	KLF4	O43474	513 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms