RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MAPKAPK3Q16644 382 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 ZNF750Q32MQ0 723 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 ARL13AQ5H913 290 aaPredicted RBP26.18■■□□□ 1.78
SSBP4-206ENST00000599699 SLC25A25Q6KCM7 469 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 TRIM46Q7Z4K8 759 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 OR8K3Q8NH51 312 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 PPP1R14CQ8TAE6 165 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 KLHL29Q96CT2 875 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 TAAR6Q96RI8 345 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 BARD1Q99728 777 aaKnown RBP26.18■■□□□ 1.78
SSBP4-206ENST00000599699 PCDHGB6Q9Y5F9 930 aa26.18■■□□□ 1.78
SSBP4-206ENST00000599699 SHANK1Q9Y566 2161 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 TMEM200CA6NKL6 621 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 CHRNGP07510 517 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 SP1P08047 785 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 IL3P08700 152 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 ANXA4P09525 319 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-206ENST00000599699 CPMP14384 443 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 PORP16435 677 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-206ENST00000599699 GALNSP34059 522 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 HK2P52789 917 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 SPRED3Q2MJR0 410 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 CYP4Z2PQ8N1L4 340 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 CDC26Q8NHZ8 85 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 ASB15Q8WXK1 588 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 SSU72Q9NP77 194 aaKnown RBP26.17■■□□□ 1.78
SSBP4-206ENST00000599699 KCNK9Q9NPC2 374 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 CES1P1Q9UKY3 287 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 ERVK-11Q9UQG0 969 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 ZNF780BQ9Y6R6 833 aa26.17■■□□□ 1.78
SSBP4-206ENST00000599699 CRYABP02511 175 aaKnown RBP26.16■■□□□ 1.78
SSBP4-206ENST00000599699 IGKV3-11P04433 115 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 NT5EP21589 574 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 FEN1P39748 380 aaKnown RBP26.16■■□□□ 1.78
SSBP4-206ENST00000599699 PMP22Q01453 160 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 RNF111Q6ZNA4 994 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 GALNTL5Q7Z4T8 443 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 NUDCD3Q8IVD9 361 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 GALNT12Q8IXK2 581 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 C16orf78Q8WTQ4 265 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 PGM2Q96G03 612 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 SCMH1Q96GD3 660 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 TRIM45Q9H8W5 580 aaPredicted RBP26.16■■□□□ 1.78
SSBP4-206ENST00000599699 CXorf21Q9HAI6 301 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 PFDN4Q9NQP4 134 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 PTGDR2Q9Y5Y4 395 aa26.16■■□□□ 1.78
SSBP4-206ENST00000599699 ANKUB1A6NFN9 424 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 A8MVJ9 347 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 SLC28A1O00337 649 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 RGS14O43566 566 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 RSL1D1O76021 490 aaKnown RBP26.15■■□□□ 1.78
SSBP4-206ENST00000599699 CBX6O95503 412 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 CSNK2A2P19784 350 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-206ENST00000599699 ETV4P43268 484 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 SERPINB4P48594 390 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 HEPACAMQ14CZ8 416 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 BEND6Q5SZJ8 279 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-206ENST00000599699 GALNT18Q6P9A2 607 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 SLC29A4Q7RTT9 530 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 FAM98AQ8NCA5 519 aaKnown RBP26.15■■□□□ 1.78
SSBP4-206ENST00000599699 AGR3Q8TD06 166 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 PKNOX2Q96KN3 472 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 RASL10BQ96S79 203 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 STMN4Q9H169 189 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-206ENST00000599699 HPF1Q9NWY4 346 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 HEY2Q9UBP5 337 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 UTS2RQ9UKP6 389 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 TRAF6Q9Y4K3 522 aa26.15■■□□□ 1.78
SSBP4-206ENST00000599699 WDR91A4D1P6 747 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 SEC22BO75396 215 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 DRD2P14416 443 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 SERPINB5P36952 375 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 EIF2S3LQ2VIR3 472 aaKnown RBP26.14■■□□□ 1.78
SSBP4-206ENST00000599699 SH2D4BQ5SQS7 431 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 KANK2Q63ZY3 851 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 IL20RBQ6UXL0 311 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 C9orf40Q8IXQ3 194 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 DNAJB8Q8NHS0 232 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 PRR7Q8TB68 274 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 GAL3ST4Q96RP7 486 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 SIRT5Q9NXA8 310 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 POLR3HQ9Y535 204 aaPredicted RBP26.14■■□□□ 1.78
SSBP4-206ENST00000599699 ACTL7BQ9Y614 415 aa26.14■■□□□ 1.78
SSBP4-206ENST00000599699 TMEM233B4DJY2 109 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 TM9SF1O15321 606 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 LINC00032P0C843 101 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 SOX3P41225 446 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 SRSF11Q05519 484 aaKnown RBP26.13■■□□□ 1.77
SSBP4-206ENST00000599699 ZNF763Q0D2J5 394 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 FAM180BQ6P0A1 224 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 ZNF227Q86WZ6 799 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 HOMEZQ8IX15 550 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 DDIASQ8IXT1 998 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 CLYBLQ8N0X4 340 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 ST6GALNAC3Q8NDV1 305 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 NUBPLQ8TB37 319 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 EXOSC8Q96B26 276 aaKnown RBP26.13■■□□□ 1.77
SSBP4-206ENST00000599699 C11orf24Q96F05 449 aaPredicted RBP26.13■■□□□ 1.77
SSBP4-206ENST00000599699 BRINP2Q9C0B6 783 aa26.13■■□□□ 1.77
SSBP4-206ENST00000599699 DNAJC15Q9Y5T4 150 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms