RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 KCND3Q9UK17 655 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 DIMT1Q9UNQ2 313 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 PLXNB3Q9ULL4 1909 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 LINC00862A6NCI5 91 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 TNNI3P19429 210 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 AGFG1P52594 562 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 UBE3AQ05086 875 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 SF3A2Q15428 464 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 HECTD3Q5T447 861 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 CCNJQ5T5M9 372 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 TRIM40Q6P9F5 258 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 TMEM163Q8TC26 289 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 GATAD2BQ8WXI9 593 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 MAGEB10Q96LZ2 347 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 DEFB118Q96PH6 123 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 WACQ9BTA9 647 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 WRAP53Q9BUR4 548 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 RC3H2Q9HBD1 1191 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 CDH10Q9Y6N8 788 aa18.36■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF840PA6NDX5 716 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 I3L521 148 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 CASKO14936 926 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 PRKYO43930 277 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 NCR1O76036 304 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 GSTM1P09488 218 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ENPP1P22413 925 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 OPRD1P41143 372 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 PCBP3P57721 371 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 WDR5P61964 334 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 FABP5Q01469 135 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 MC1RQ01726 317 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 BCL2L1Q07817 233 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF630Q2M218 657 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ATP13A5Q4VNC0 1218 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF57Q68EA5 555 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 QSOX2Q6ZRP7 698 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 THOC6Q86W42 341 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 GOT1L1Q8NHS2 421 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 PHF21AQ96BD5 680 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 AP2M1Q96CW1 435 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ELF5Q9UKW6 265 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ANGPT4Q9Y264 503 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 SF3B6Q9Y3B4 125 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 KIAA1671Q9BY89 1806 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 SLC30A4O14863 429 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF250P15622 560 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF8P17098 575 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 PTGS2P35354 604 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 AVPR1BP47901 424 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 LRRC32Q14392 662 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 OCLNQ16625 522 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 TEX261Q6UWH6 196 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF782Q6ZMW2 699 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 RFLNAQ6ZTI6 216 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 NACC2Q96BF6 587 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 GPR137Q96N19 417 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 BHLHE41Q9C0J9 482 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 POLR2J3Q9H1A7 115 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 PCDH10Q9P2E7 1040 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 U3KQ87 197 aa18.35■□□□□ 0.53
ARHGEF1-218ENST00000599589 GFYI3L273 518 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 SMAD6O43541 496 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 PSIP1O75475 530 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 STC2O76061 302 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 OR56A5P0C7T3 313 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 ELAVL4P26378 380 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 TIA1P31483 386 aaKnown RBP eCLIP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 SOAT1P35610 550 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 EVX1P49640 407 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 VEGFBP49765 207 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 AP1S1P61966 158 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 RPS26P11Q5JNZ5 115 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 FAAH2Q6GMR7 532 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZFP41Q8N8Y5 198 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 MED8Q96G25 268 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 KCNJ15Q99712 375 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 SLC28A3Q9HAS3 691 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 FAM8A1Q9UBU6 413 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 CIB4A0PJX0 185 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 STK25O00506 426 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 UGDHO60701 494 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 ARAFP10398 606 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 CTBP2P56545 445 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 WNT4P56705 351 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 TAGLNQ01995 201 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF33BQ06732 778 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 FCN2Q15485 313 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 KLHL22Q53GT1 634 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 DCST1Q5T197 706 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF680Q8NEM1 530 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 ZNF431Q8TF32 576 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 VN1R3Q9BXE9 311 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 C1QTNF7Q9BXJ2 289 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 REEP4Q9H6H4 257 aa18.34■□□□□ 0.53
ARHGEF1-218ENST00000599589 CWH43Q9H720 699 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms