RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 OR52E8Q6IFG1 317 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 LYPD8Q6UX82 237 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 RGS9BPQ6ZS82 235 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 SLC15A4Q8N697 577 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 GOLM1Q8NBJ4 401 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 OR4K14Q8NGD5 310 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 ACMSDQ8TDX5 336 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 FAM173AQ9BQD7 235 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 SACM1LQ9NTJ5 587 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 NMRK1Q9NWW6 199 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 SLC12A4Q9UP95 1085 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 HRH3Q9Y5N1 445 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 CROCCQ5TZA2 2017 aa13.93□□□□□ -0.18
LIG1-215ENST00000597901 A0A0G2JMM0 328 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 A0A1W2PPB8 328 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 A0A1W2PRS3 328 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 KIR3DP1A8MWS1 328 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 E9PLN8 166 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 GLSO94925 669 aaPredicted RBP13.92□□□□□ -0.18
LIG1-215ENST00000597901 P04436 131 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 PYGBP11216 843 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 AGAP20933 346 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 ATP5F1P24539 256 aaPredicted RBP13.92□□□□□ -0.18
LIG1-215ENST00000597901 HTR1EP28566 365 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 MAPK12P53778 367 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 SLC37A1P57057 533 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 TBL3Q12788 808 aaKnown RBP13.92□□□□□ -0.18
LIG1-215ENST00000597901 ZNF630Q2M218 657 aaPredicted RBP13.92□□□□□ -0.18
LIG1-215ENST00000597901 NDUFAF5Q5TEU4 345 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 FAM219BQ5XKK7 198 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 SLC22A10Q63ZE4 541 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 PAOXQ6QHF9 649 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 C3P1Q6ZMU1 363 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 RNF111Q6ZNA4 994 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 FAM47EQ6ZV65 393 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 SLC29A4Q7RTT9 530 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 FAM57AQ8TBR7 257 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 SLC22A8Q8TCC7 542 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 TM4SF18Q96CE8 201 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 VKORC1Q9BQB6 163 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 TTTY12Q9BZ98 90 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 CXorf21Q9HAI6 301 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 BRF2Q9HAW0 419 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 TBK1Q9UHD2 729 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 TRPS1Q9UHF7 1281 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 DCDC2Q9UHG0 476 aa13.92□□□□□ -0.18
LIG1-215ENST00000597901 MYO7BQ6PIF6 2116 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 NBPF19A0A087WUL8 3843 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 A0A1W2PPM1 405 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 OR6C76A6NM76 312 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 FAM166BA8MTA8 275 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 MANBAO00462 879 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 GUCY1B2O75343 617 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 CLPSP04118 112 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 TPOP07202 933 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 GSTA1P08263 222 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 CCL3P10147 92 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 SSTR4P31391 388 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 PIGAP37287 484 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 DNASE1L1P49184 302 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 PRKAA2P54646 552 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 GALNT1Q10472 559 aaPredicted RBP13.91□□□□□ -0.18
LIG1-215ENST00000597901 FUT7Q11130 342 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 FOXO1Q12778 655 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 ARHGAP11AQ6P4F7 1023 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 GK5Q6ZS86 529 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 NCCRP1Q6ZVX7 275 aaPredicted RBP13.91□□□□□ -0.18
LIG1-215ENST00000597901 COMMD6Q7Z4G1 85 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 SLC22A16Q86VW1 577 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 CNPY4Q8N129 248 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 CDYL2Q8N8U2 506 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 EIF1ADQ8N9N8 165 aaKnown RBP13.91□□□□□ -0.18
LIG1-215ENST00000597901 METTL6Q8TCB7 284 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 MZB1Q8WU39 189 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 PHF10Q8WUB8 498 aaKnown RBP13.91□□□□□ -0.18
LIG1-215ENST00000597901 CHTF18Q8WVB6 975 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 MARVELD3Q96A59 401 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 TMEM237Q96Q45 408 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 DMRTA2Q96SC8 542 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 WWTR1Q9GZV5 400 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 ZDHHC11Q9H8X9 412 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 IL1RL2Q9HB29 575 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 SH2D2AQ9NP31 389 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
LIG1-215ENST00000597901 PSMC3IPQ9P2W1 217 aaPredicted RBP13.91□□□□□ -0.18
LIG1-215ENST00000597901 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 CES1P1Q9UKY3 287 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
LIG1-215ENST00000597901 DIDO1Q9BTC0 2240 aaKnown RBP13.9□□□□□ -0.18
LIG1-215ENST00000597901 C2orf92A0A1B0GVN3 265 aa13.9□□□□□ -0.18
LIG1-215ENST00000597901 C1orf226A1L170 272 aa13.9□□□□□ -0.18
LIG1-215ENST00000597901 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
LIG1-215ENST00000597901 ACOT7O00154 380 aa13.9□□□□□ -0.18
LIG1-215ENST00000597901 ULK1O75385 1050 aa13.9□□□□□ -0.18
LIG1-215ENST00000597901 KRT6AP02538 564 aa13.9□□□□□ -0.18
LIG1-215ENST00000597901 KRT6BP04259 564 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms