RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SAGE2PA6NJ88 616 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 A6NL46 340 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 C17orf105B2RV13 164 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 PRKNO60260 465 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 OR10H2O60403 315 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 TBX19O60806 448 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 DDAH2O95865 285 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 HPP00738 406 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 CYC1P08574 325 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 SLC35E2P0CK97 266 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 CSNK2A2P19784 350 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 PRPS1L1P21108 318 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 HPCAL1P37235 193 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 WNT3P56703 355 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 SLC26A5P58743 744 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 MRPS35P82673 323 aaKnown RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 MGAT2Q10469 447 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 RAPSNQ13702 412 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 ZNF267Q14586 743 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 RPS6KA2Q15349 733 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 GSTA3Q16772 222 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 COL28A1Q2UY09 1125 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 PDCD4Q53EL6 469 aaKnown RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 CRTC2Q53ET0 693 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 SPANXN4Q5MJ08 99 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 DCAF10Q5QP82 559 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 OR4F3Q6IEY1 312 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 SPATA21Q7Z572 469 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 ST13P4Q8IZP2 240 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 OR9A2Q8NGT5 310 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 THAP4Q8WY91 577 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 COQ8BQ96D53 544 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 NUDT9Q9BW91 350 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 ZNF385DQ9H6B1 395 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 ADAP2Q9NPF8 381 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 SDR39U1Q9NRG7 319 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 TAS2R7Q9NYW3 318 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 EHD3Q9NZN3 535 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 ZNF223Q9UK11 482 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-206ENST00000596676 PSME2Q9UL46 239 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 ERVK-11Q9UQG0 969 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 KCNMB2Q9Y691 235 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 LOC400499M0QZD8 3231 aa14.47□□□□□ -0.09
SMCO4-206ENST00000596676 DOCK10Q96BY6 2186 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 A0A1W2PQ72 361 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 PDPK1O15530 556 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 SHOX2O60902 331 aaPredicted RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 SLC22A3O75751 556 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CLPSP04118 112 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 ITGAMP11215 1152 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 IDO1P14902 403 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 PCSK2P16519 638 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 SSTR4P31391 388 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CCL11P51671 97 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 NCBP2P52298 156 aaKnown RBP eCLIP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 UCNP55089 124 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 PLIN5Q00G26 463 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 DUSP8Q13202 625 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 EXOSC7Q15024 291 aaKnown RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 ELAVL1Q15717 326 aaKnown RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 TBR1Q16650 682 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 PRICKLE4Q2TBC4 344 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 BTBD16Q32M84 506 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 TRMT12Q53H54 448 aaKnown RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CPTPQ5TA50 214 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 FUNDC1Q8IVP5 155 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CLECL1Q8IZS7 167 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 MIER2Q8N344 545 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 LRRC25Q8N386 305 aaPredicted RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 EXTL1Q92935 676 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 RIT1Q92963 219 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 NCLNQ969V3 563 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 RBM18Q96H35 190 aaKnown RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 SENP5Q96HI0 755 aaPredicted RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 AMDHD1Q96NU7 426 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 LPAR4Q99677 370 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 SIKE1Q9BRV8 207 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CNPPD1Q9BV87 410 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 OR8D2Q9GZM6 311 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 ING2Q9H160 280 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 EPN3Q9H201 632 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 PRORYQ9H606 182 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CLMPQ9H6B4 373 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 LIN28AQ9H9Z2 209 aaKnown RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 CXorf21Q9HAI6 301 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 MAT2BQ9NZL9 334 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 ERVK-19Q9WJR5 959 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 ENTPD4Q9Y227 616 aa14.46□□□□□ -0.09
SMCO4-206ENST00000596676 NUP214P35658 2090 aaPredicted RBP14.46□□□□□ -0.09
SMCO4-206ENST00000596676 SNX3O60493 162 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 S1PR1P21453 382 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 CDK9P50750 372 aaKnown RBP14.45□□□□□ -0.1
SMCO4-206ENST00000596676 GPR143P51810 404 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 C21orf58P58505 322 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 HSPB3Q12988 150 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 UBAP2LQ14157 1087 aaKnown RBP14.45□□□□□ -0.1
SMCO4-206ENST00000596676 CEBPEQ15744 281 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 FAM174BQ3ZCQ3 159 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 FCRLBQ6BAA4 426 aa14.45□□□□□ -0.1
SMCO4-206ENST00000596676 C16orf47Q6ZP98 133 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms