RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SLAMF7Q9NQ25 335 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 FGF21Q9NSA1 209 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 CUTCQ9NTM9 273 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 C5AR2Q9P296 337 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ENTPD4Q9Y227 616 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 SPTBP11277 2137 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 A0A0A6YYC8 382 aaPredicted RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 GLOD5A6NK44 160 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 WASHC1A8K0Z3 465 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 D6RAR5 112 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 I3L1I5 382 aaPredicted RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 ERVH48-1M5A8F1 160 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 CHST10O43529 356 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 RDH16O75452 317 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 PRKRAO75569 313 aaKnown RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 GPX2P18283 190 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 CSNK2A2P19784 350 aaPredicted RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 UQCRC2P22695 453 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 NTSP30990 170 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 OLR1P78380 273 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 ABHD18Q0P651 414 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 SPIDRQ14159 915 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 MED25Q71SY5 747 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 BPHLQ86WA6 291 aaPredicted RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 CALHM3Q86XJ0 350 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 PTRH1Q86Y79 214 aaKnown RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 FAM156AQ8NDB6 213 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 TNIP2Q8NFZ5 429 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 OR5T3Q8NGG3 340 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 TANKQ92844 425 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 NAF1Q96HR8 494 aaKnown RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 ZNF681Q96N22 645 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 ZNF583Q96ND8 569 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 AMDHD1Q96NU7 426 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 BBS4Q96RK4 519 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 CSF3RQ99062 836 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 KCTD14Q9BQ13 255 aaPredicted RBP12.67□□□□□ -0.38
VMP1-217ENST00000593168 TRIM8Q9BZR9 551 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 GLIPR2Q9H4G4 154 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 SYNDIG1Q9H7V2 258 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 CDC14AQ9UNH5 594 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 CORO2BQ9UQ03 480 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 ZNF780BQ9Y6R6 833 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 MAST4O15021 2626 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 MYO18BQ8IUG5 2567 aa12.67□□□□□ -0.38
VMP1-217ENST00000593168 ZNF749O43361 778 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 ENTPD5O75356 428 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 ERAL1O75616 437 aaKnown RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 KRT75O95678 551 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 MT-CO3P00414 261 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 ABCB1P08183 1280 aaPredicted RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 TCN1P20061 433 aaPredicted RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 MPIP34949 423 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 GZMMP51124 257 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 E2F1Q01094 437 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 GAB1Q13480 694 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 FLOT2Q14254 428 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 FAM180BQ6P0A1 224 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 ZNF551Q7Z340 670 aaPredicted RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 SERPINA11Q86U17 422 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 IFNEQ86WN2 208 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 OR4K14Q8NGD5 310 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 OR10A6Q8NH74 314 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 JADE3Q92613 823 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 AURKBQ96GD4 344 aaPredicted RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 DPH2Q9BQC3 489 aaPredicted RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 NDC1Q9BTX1 674 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 SEMA4CQ9C0C4 833 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 PCDHAC1Q9H158 963 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 RASSF4Q9H2L5 321 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 CPNE5Q9HCH3 593 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 SIDT1Q9NXL6 827 aaKnown RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 ACTR3BQ9P1U1 418 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 GMPR2Q9P2T1 348 aaKnown RBP12.66□□□□□ -0.38
VMP1-217ENST00000593168 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
VMP1-217ENST00000593168 FAM220BPB1ANY3 271 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 PYCARD-AS1I3L0S3 204 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 DSCR3O14972 297 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 STAMBPO95630 424 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 GPR75O95800 540 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 PPP2R1BP30154 601 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 XKP51811 444 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 NCBP2P52298 156 aaKnown RBP eCLIP12.65□□□□□ -0.389e-8■□□□□ 10.2
VMP1-217ENST00000593168 VAC14Q08AM6 782 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 CCNIQ14094 377 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 TMEM64Q6YI46 380 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 TTLL10Q6ZVT0 673 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 DHFR2Q86XF0 187 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 ZNF248Q8NDW4 579 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 OR2T12Q8NG77 320 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 OR52N2Q8NGI0 321 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 SUN3Q8TAQ9 357 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 FAM120BQ96EK7 910 aaKnown RBP12.65□□□□□ -0.38
VMP1-217ENST00000593168 MMABQ96EY8 250 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms