RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 TM9SF2Q99805 663 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 POLDIP3Q9BY77 421 aaKnown RBP17.07■□□□□ 0.32
SPC24-206ENST00000592540 MYNNQ9NPC7 610 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 ATP13A2Q9NQ11 1180 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 TEKT2Q9UIF3 430 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 C5orf58C9J3I9 102 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 HPGDSO60760 199 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 BCHEP06276 602 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 MYL12AP19105 171 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 DGKGP49619 791 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 CCL23P55773 120 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 SNRPD1P62314 119 aaKnown RBP17.07■□□□□ 0.32
SPC24-206ENST00000592540 TPBGQ13641 420 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 RBM45Q8IUH3 476 aaKnown RBP17.07■□□□□ 0.32
SPC24-206ENST00000592540 TMEM163Q8TC26 289 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 MARVELD1Q9BSK0 173 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 OR51B5Q9H339 312 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 ZSCAN32Q9NX65 697 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 B4GALT6Q9UBX8 382 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 KCNE2Q9Y6J6 123 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 KIF26AQ9ULI4 1882 aaPredicted RBP17.06■□□□□ 0.32
SPC24-206ENST00000592540 ZNF197O14709 1029 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 SLC43A1O75387 559 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 TGFB1P01137 390 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
SPC24-206ENST00000592540 NR2F6P10588 404 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 ARSBP15848 533 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 UQCRC2P22695 453 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 RPS26P62854 115 aaKnown RBP17.06■□□□□ 0.32
SPC24-206ENST00000592540 ABATP80404 500 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 MAB21L1Q13394 359 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 NFE2L1Q14494 772 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 C3orf38Q5JPI3 329 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 SLC25A30Q5SVS4 291 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 UNC5DQ6UXZ4 953 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 DEF8Q6ZN54 512 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 GATAD2BQ8WXI9 593 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 SCAMP4Q969E2 229 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 LRR1Q96L50 414 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 ZNF582Q96NG8 517 aaPredicted RBP17.06■□□□□ 0.32
SPC24-206ENST00000592540 QRFPRQ96P65 431 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 TEFMQ96QE5 360 aaKnown RBP17.06■□□□□ 0.32
SPC24-206ENST00000592540 HDHD5Q9BXW7 423 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 NLNQ9BYT8 704 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 SATB2Q9UPW6 733 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 GSTK1Q9Y2Q3 226 aa17.06■□□□□ 0.32
SPC24-206ENST00000592540 WASHC1A8K0Z3 465 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 NPC1O15118 1278 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 SEPT4O43236 478 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 GALTP07902 379 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 IFI30P13284 250 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 CD70P32970 193 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 CTSOP43234 321 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 PREPP48147 710 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 PNLIPRP1P54315 467 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 FABP5Q01469 135 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 IL18Q14116 193 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 SYTL3Q4VX76 610 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 ESCO2Q56NI9 601 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 METAP1DQ6UB28 335 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 Q6ZNB5 142 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 METTL3Q86U44 580 aaKnown RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 HORMAD2Q8N7B1 307 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 SLC7A13Q8TCU3 470 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 TMEM43Q9BTV4 400 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 CXorf36Q9H7Y0 433 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 DMRT3Q9NQL9 472 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 FOXE1O00358 373 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 ORC5O43913 435 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 KLK1P06870 262 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 GAS1P54826 345 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 ALDH6A1Q02252 535 aaKnown RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 KLHL22Q53GT1 634 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 CCSAPQ6IQ19 270 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 FAM180BQ6P0A1 224 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 TNFAIP8L2Q6P589 184 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 AMIGO1Q86WK6 493 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 LILRA3Q8N6C8 439 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 OR4D11Q8NGI4 311 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 MTERF3Q96E29 417 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 MAP6Q96JE9 813 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 FUZQ9BT04 418 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 SLC6A16Q9GZN6 736 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 SEMA3GQ9NS98 782 aa17.05■□□□□ 0.32
SPC24-206ENST00000592540 DNMT3AQ9Y6K1 912 aaPredicted RBP17.05■□□□□ 0.32
SPC24-206ENST00000592540 LOC102723532A0A0G2JNH3 316 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 LEUTXA8MZ59 168 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 CASKO14936 926 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 APOL3O95236 402 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 M6PRP20645 277 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 CTGFP29279 349 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 FGF9P31371 208 aaPredicted RBP17.04■□□□□ 0.32
SPC24-206ENST00000592540 UQCRC1P31930 480 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 EVI2BP34910 448 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 EVX1P49640 407 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 SLBPQ14493 270 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPC24-206ENST00000592540 GINS1Q14691 196 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 ACSM5Q6NUN0 579 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms