RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 TYROBPO43914 113 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 PCDH7O60245 1069 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CRYABP02511 175 aaKnown RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SP1P08047 785 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 PORP16435 677 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 DEKP35659 375 aaKnown RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 HK2P52789 917 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ERVK-8P63133 956 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 RAE1P78406 368 aaKnown RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 PMP22Q01453 160 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 BTKQ06187 659 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ELOAQ14241 798 aaKnown RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF267Q14586 743 aaPredicted RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 IMPG1Q17R60 797 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SPRED3Q2MJR0 410 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF750Q32MQ0 723 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CEP85LQ5SZL2 805 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CLEC6AQ6EIG7 209 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SLC25A25Q6KCM7 469 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SLC48A1Q6P1K1 146 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 GALNT18Q6P9A2 607 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CLEC18BQ6UXF7 455 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 TRIM46Q7Z4K8 759 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 GALNTL5Q7Z4T8 443 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 C9orf40Q8IXQ3 194 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CYP4Z2PQ8N1L4 340 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 TMEM178AQ8NBL3 297 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CLEC18CQ8NCF0 446 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ST6GALNAC3Q8NDV1 305 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 DOK4Q8TEW6 326 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ASB15Q8WXK1 588 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 NR4A3Q92570 626 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SCMH1Q96GD3 660 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ZIM3Q96PE6 472 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 RASL10BQ96S79 203 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SLX1AQ9BQ83 275 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CNPPD1Q9BV87 410 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 FAIM2Q9BWQ8 316 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CENPHQ9H3R5 247 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CXorf21Q9HAI6 301 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.53□□□□□ -1.048e-7■■■■■ 28.6
DNMT1-223ENST00000591239 PSME2Q9UL46 239 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 ERVK-19Q9WJR5 959 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 DLGAP4Q9Y2H0 992 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 SVILO95425 2214 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 GOLGA6L10A6NI86 522 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 A8MVJ9 347 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 AZIN1O14977 448 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 CTIFO43310 598 aaKnown RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 NME2P1O60361 137 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 NPHS1O60500 1241 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ERAL1O75616 437 aaKnown RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 OR6B1O95007 311 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 CHRNGP07510 517 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 IL3P08700 152 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ANXA4P09525 319 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 EDN3P14138 238 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 CPMP14384 443 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 DRD2P14416 443 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 NME2P22392 152 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 TIA1P31483 386 aaKnown RBP eCLIP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 FEN1P39748 380 aaKnown RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 SOX3P41225 446 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ETV4P43268 484 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ALDH9A1P49189 494 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 SLC37A1P57057 533 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 SRSF11Q05519 484 aaKnown RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 SRSF1Q07955 248 aaKnown RBP eCLIP8.52□□□□□ -1.053e-6■□□□□ 9.3
DNMT1-223ENST00000591239 UBAP2LQ14157 1087 aaKnown RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 MPEG1Q2M385 716 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 PIGGQ5H8A4 983 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ARL13AQ5H913 290 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 IL20RBQ6UXL0 311 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 RNF111Q6ZNA4 994 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ZCCHC23Q6ZST2 131 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 MDGA2Q7Z553 956 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 EXOC3L1Q86VI1 746 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 GALNT12Q8IXK2 581 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 GPALPP1Q8IXQ4 340 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 FAM26EQ8N5C1 309 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 NUBPLQ8TB37 319 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 C16orf78Q8WTQ4 265 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ZBTB9Q96C00 473 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 EBPLQ9BY08 206 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 RRAGDQ9NQL2 400 aaPredicted RBP8.52□□□□□ -1.05
DNMT1-223ENST00000591239 HPF1Q9NWY4 346 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 SIRT5Q9NXA8 310 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 HEY2Q9UBP5 337 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ERVK-11Q9UQG0 969 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 CCL27Q9Y4X3 112 aa8.52□□□□□ -1.05
DNMT1-223ENST00000591239 ASPDHA6ND91 283 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 OR6C76A6NM76 312 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF354AO60765 605 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 ERLIN1O75477 346 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 RSL1D1O76021 490 aaKnown RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 WISP2O76076 250 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CHEK2O96017 543 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CLPSP04118 112 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms