RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 EXO1Q9UQ84 846 aaKnown RBP18.81■□□□□ 0.6
DDX39A-207ENST00000588542 ATP6AP2A0A1C7CYW4 349 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 TMEM200CA6NKL6 621 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 OR10H2O60403 315 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 ERAL1O75616 437 aaKnown RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 ATP6AP2O75787 350 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 WDPCPO95876 746 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PORP16435 677 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 RPL14P50914 215 aaKnown RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 RPL38P63173 70 aaKnown RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 C2orf80Q0P641 193 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 HEPACAMQ14CZ8 416 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PRSS53Q2L4Q9 553 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PLEKHN1Q494U1 663 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 GALNTL6Q49A17 601 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 FAM180BQ6P0A1 224 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 RPS19BP1Q86WX3 136 aaKnown RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 LGI4Q8N135 537 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 BEST3Q8N1M1 668 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PNPLA2Q96AD5 504 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 KLHL29Q96CT2 875 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 C19orf60Q96EN9 201 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 CNRIP1Q96F85 164 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-207ENST00000588542 EGLN2Q96KS0 407 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 CCT7Q99832 543 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 RNF32Q9H0A6 362 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 MANSC1Q9H8J5 431 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 CXorf21Q9HAI6 301 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PNPOQ9NVS9 261 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PSME2Q9UL46 239 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 B3GNT3Q9Y2A9 372 aa18.8■□□□□ 0.6
DDX39A-207ENST00000588542 PEX11AO75192 247 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 SORBS2O94875 1100 aaKnown RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 F10P00742 488 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 CT62P0C5K7 136 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 SDC1P18827 310 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 SOX18P35713 384 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 FEN1P39748 380 aaKnown RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 ST13P50502 369 aaKnown RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 MLF1P58340 268 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 PDCD2Q16342 344 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 CATSPER1Q8NEC5 780 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 CDC26Q8NHZ8 85 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 THAP3Q8WTV1 239 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 RIT1Q92963 219 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 FBXL20Q96IG2 436 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 PPP3R2Q96LZ3 170 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 THAP1Q9NVV9 213 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 EHD3Q9NZN3 535 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 UTS2RQ9UKP6 389 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 WBP11Q9Y2W2 641 aaKnown RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 TMED5Q9Y3A6 229 aa18.79■□□□□ 0.6
DDX39A-207ENST00000588542 HEMK1Q9Y5R4 338 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-207ENST00000588542 ZFAND5O76080 213 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 CLPSP04118 112 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 DDCP20711 480 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 CASRP41180 1078 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 HK2P52789 917 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 ERVK-8P63133 956 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 OCRLQ01968 901 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 MGAT2Q10469 447 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 ZNF267Q14586 743 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-207ENST00000588542 C6orf136Q5SQH8 315 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 ATG16L1Q676U5 607 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 HSDL2Q6YN16 418 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 IKBIPQ70UQ0 350 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 TRIM42Q8IWZ5 723 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 ZNF75CPQ92670 426 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-207ENST00000588542 LUZP4Q9P127 313 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 ERVK-19Q9WJR5 959 aa18.78■□□□□ 0.6
DDX39A-207ENST00000588542 DYTNA2CJ06 578 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 KLF11O14901 512 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 DYRK3O43781 588 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 ATP1B1P05026 303 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 BCKDHAP12694 445 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 CSNK2A2P19784 350 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-207ENST00000588542 PTGER1P34995 402 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 TNFSF10P50591 281 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 PPP2R2AP63151 447 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 RNF4P78317 190 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 ARG2P78540 354 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 CEBPEQ15744 281 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 ATP6AP1LQ52LC2 224 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 ZNF468Q5VIY5 522 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-207ENST00000588542 C16orf47Q6ZP98 133 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-207ENST00000588542 TICAM1Q8IUC6 712 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 C9orf40Q8IXQ3 194 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 KIRREL3Q8IZU9 778 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 OR8K3Q8NH51 312 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 EXOSC8Q96B26 276 aaKnown RBP18.77■□□□□ 0.6
DDX39A-207ENST00000588542 ART5Q96L15 291 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 CNPPD1Q9BV87 410 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 EPN3Q9H201 632 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 LIN28AQ9H9Z2 209 aaKnown RBP18.77■□□□□ 0.6
DDX39A-207ENST00000588542 SLC35C2Q9NQQ7 365 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 COPS7AQ9UBW8 275 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 BAIAP2L1Q9UHR4 511 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 ZNF780BQ9Y6R6 833 aa18.77■□□□□ 0.6
DDX39A-207ENST00000588542 EML6Q6ZMW3 1958 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 OR5H15A6NDH6 313 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms