RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 TRIM25Q14258 630 aaKnown RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 RCN1Q15293 331 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 NKAIN1Q4KMZ8 207 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 RFTN2Q52LD8 501 aaPredicted RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 TCHHL1Q5QJ38 904 aaPredicted RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 IRAK1BP1Q5VVH5 260 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 MRPL14Q6P1L8 145 aaKnown RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 C8orf82Q6P1X6 216 aaPredicted RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 IGFL3Q6UXB1 125 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 TREML4Q6UXN2 200 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SLCO4C1Q6ZQN7 724 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 COX15Q7KZN9 410 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 FUNDC1Q8IVP5 155 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.38□□□□□ -1.23
VMP1-204ENST00000587259 LAS2Q8IYD9 372 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 PRSS58Q8IYP2 241 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 LIX1Q8N485 282 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 NATD1Q8N6N6 113 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 ST6GALNAC3Q8NDV1 305 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 OR8J3Q8NGG0 315 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 OR9I1Q8NGQ6 314 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 OR2Y1Q8NGV0 311 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 FBXO27Q8NI29 283 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 DNAJB14Q8TBM8 379 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 WDR20Q8TBZ3 569 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 PROKR1Q8TCW9 393 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SLC13A3Q8WWT9 602 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 NEIL2Q969S2 332 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SLC22A18Q96BI1 424 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 CCDC124Q96CT7 223 aaKnown RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 LRRC58Q96CX6 371 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 LRGUKQ96M69 825 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 FER1L6-AS2Q96M78 137 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 IL17FQ96PD4 163 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 PRPF18Q99633 342 aaKnown RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 WDR77Q9BQA1 342 aaPredicted RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 C1orf50Q9BV19 199 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SOX17Q9H6I2 414 aaPredicted RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SIRT5Q9NXA8 310 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 C6orf203Q9P0P8 240 aaPredicted RBP7.38□□□□□ -1.23
VMP1-204ENST00000587259 TMEM181Q9P2C4 612 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 CTSFQ9UBX1 484 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 SH3BGRL2Q9UJC5 107 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 ITGB1BP2Q9UKP3 347 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 PADI2Q9Y2J8 665 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 L3MBTL1Q9Y468 752 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 C2CD3Q4AC94 2353 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 CELSR1Q9NYQ6 3014 aa7.38□□□□□ -1.23
VMP1-204ENST00000587259 ZGRF1Q86YA3 2104 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 CNTRLQ7Z7A1 2325 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 FBP2O00757 339 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 ANKRD28O15084 1053 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 HNRNPRO43390 633 aaKnown RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 ERN1O75460 977 aaKnown RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 GMNNO75496 209 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 BCAS2O75934 225 aaPredicted RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 PDE5AO76074 875 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 KLHL18O94889 574 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 MED26O95402 600 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 PGRP06401 933 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 PCNAP12004 261 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 BCKDHAP12694 445 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 NPPBP16860 134 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 PTX3P26022 381 aaPredicted RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 S100A3P33764 101 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 VHLP40337 213 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 OR1D4P47884 311 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 ST13P50502 369 aaKnown RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 CCR8P51685 355 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 UFM1P61960 85 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 HMGCS1Q01581 520 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 SLC34A1Q06495 639 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 TSTA3Q13630 321 aaPredicted RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 KIAA0040Q15053 153 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 MAPKAPK3Q16644 382 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 VPS26BQ4G0F5 336 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 TIGD2Q4W5G0 525 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 SGO1Q5FBB7 561 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 MTX3Q5HYI7 312 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 RHBDD2Q6NTF9 364 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 GALNT18Q6P9A2 607 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 SCIMPQ6UWF3 145 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 KIRREL2Q6UWL6 708 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 TMIGD1Q6UXZ0 262 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 TTLL10Q6ZVT0 673 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 IKBIPQ70UQ0 350 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 PAGE2Q7Z2X7 111 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 R3HCC1LQ7Z5L2 792 aaKnown RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 DHDDSQ86SQ9 333 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 HPS6Q86YV9 775 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 LRRC56Q8IYG6 542 aaPredicted RBP7.37□□□□□ -1.23
VMP1-204ENST00000587259 CARFQ8N187 725 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 TMEM132CQ8N3T6 1108 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 DNAJC22Q8N4W6 341 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 VPS37AQ8NEZ2 397 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 ABHD11Q8NFV4 315 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 OR7G3Q8NG95 312 aa7.37□□□□□ -1.23
VMP1-204ENST00000587259 OR2L8Q8NGY9 312 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms