RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 DUS4LO95620 317 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 FHP07954 510 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 RALAP11233 206 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 CD1DP15813 335 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 MAGEA4P43358 317 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 CLK1P49759 484 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 CCL11P51671 97 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 NDST1P52848 882 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 FKBP3Q00688 224 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 NFATC2Q13469 925 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 P2RY14Q15391 338 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 MUC21Q5SSG8 566 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 TEX35Q5T0J7 233 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 IL23RQ5VWK5 629 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 NEPROQ6NW34 567 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 C1orf186Q6ZWK4 172 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 MCM10Q7L590 875 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 GPR142Q7Z601 462 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 ITIH5Q86UX2 942 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 CARM1Q86X55 608 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 FAM131BQ86XD5 332 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 ELMOD2Q8IZ81 293 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 AQP11Q8NBQ7 271 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 PRSS33Q8NF86 280 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 FBXO25Q8TCJ0 367 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 NPRL2Q8WTW4 380 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 PCNPQ8WW12 178 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 MRPL53Q96EL3 112 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 PRICKLE1Q96MT3 831 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 COQ7Q99807 217 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 ATF6BQ99941 703 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 KRT23Q9C075 422 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 HSD3B7Q9H2F3 369 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 PANK3Q9H999 370 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 NINJ2Q9NZG7 142 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 NUDT4Q9NZJ9 180 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 THYN1Q9P016 225 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 CIDEBQ9UHD4 219 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 PLEKHA6Q9Y2H5 1048 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 ATG4BQ9Y4P1 393 aa3.09□□□□□ -1.91
SMCHD1-209ENST00000583441 IGLV4-3A0A075B6K6 122 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 LOC390937A0A1W2PQ73 354 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 H7C423 109 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 SOCS3O14543 225 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 REC8O95072 547 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 ETS1P14921 441 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 CAPGP40121 348 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 MATKP42679 507 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 RIDAP52758 137 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 PEX3P56589 373 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 GMFBP60983 142 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 RPL27P61353 136 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 ELAVL2Q12926 359 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 SNX1Q13596 522 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 LY6DQ14210 128 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 SLC17A1Q14916 467 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF146Q15072 292 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 KNOP1Q1ED39 458 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 EPC2Q52LR7 807 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 TAF1BQ53T94 588 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 RHBDD2Q6NTF9 364 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 FAM159AQ6UWV7 190 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 WDR88Q6ZMY6 472 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 YRDCQ86U90 279 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 CATSPER3Q86XQ3 398 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 ERC1Q8IUD2 1116 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 WDR49Q8IV35 697 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 PHC2Q8IXK0 858 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 LRRC17Q8N6Y2 441 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 BANPQ8N9N5 519 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 MLKLQ8NB16 471 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 Q8NBF4 154 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 C11orf45Q8TAV5 145 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 DQX1Q8TE96 717 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 PNPLA2Q96AD5 504 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 COG3Q96JB2 828 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 TAAR6Q96RI8 345 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 TNFRSF13CQ96RJ3 184 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 PSMB7Q99436 277 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 C19orf43Q9BQ61 176 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 PYGO2Q9BRQ0 406 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 CBWD1Q9BRT8 395 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 OCR1Q9BZK8 76 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 NMNAT2Q9BZQ4 307 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 SIRPDQ9H106 197 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 FAM124BQ9H5Z6 455 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 WDR41Q9HAD4 459 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 DEPPQ9NTK1 212 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 NDUFA13Q9P0J0 144 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 SPASTQ9UBP0 616 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 TUBGCP4Q9UGJ1 667 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 ASIC3Q9UHC3 531 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 BCAP29Q9UHQ4 241 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF490Q9ULM2 529 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 PLA2G4CQ9UP65 541 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 KLF2Q9Y5W3 355 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 AUP1Q9Y679 476 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 UBE4BO95155 1302 aa3.08□□□□□ -1.92
SMCHD1-209ENST00000583441 A0A0J9YWU9 116 aa3.07□□□□□ -1.92
SMCHD1-209ENST00000583441 ARHGEF33A8MVX0 844 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms