RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SLC28A2O43868 658 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 NOBOXO60393 691 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 SRPX2O60687 465 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 SDC3O75056 442 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 SERPINB7O75635 380 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 KLHL18O94889 574 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 TBX6O95947 436 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 NR2F1P10589 423 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 HOXB3P14651 431 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 CDH2P19022 906 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 MATN1P21941 496 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 AQP1P29972 269 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 FEN1P39748 380 aaKnown RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 MLLT3P42568 568 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 MAGEA8P43361 318 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 FASLGP48023 281 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 DUSP3P51452 185 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 CHN2P52757 468 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 PCBP4P57723 403 aaKnown RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 HYAL2Q12891 473 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 EPS8Q12929 822 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 GAB1Q13480 694 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 IFI44LQ53G44 452 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 CYBRD1Q53TN4 286 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 C6orf52Q5T4I8 152 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ATAD3BQ5T9A4 648 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 OR52E8Q6IFG1 317 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 FAM180BQ6P0A1 224 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 SLC48A1Q6P1K1 146 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 TNFAIP8L2Q6P589 184 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 TLDC1Q6P9B6 456 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ZNF793Q6ZN11 406 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 CBLL1Q75N03 491 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 GATAD2AQ86YP4 633 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 MCATQ8IVS2 390 aaKnown RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 CCDC116Q8IYX3 515 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 EID2Q8N6I1 236 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 C19orf47Q8N9M1 422 aaKnown RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 SFXN5Q8TD22 340 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 XAGE5Q8WWM1 108 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 RASSF5Q8WWW0 418 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 PROX1Q92786 737 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 COL26A1Q96A83 441 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 TM4SF19Q96DZ7 209 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 HSH2DQ96JZ2 352 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ZNF597Q96LX8 424 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 AMDHD1Q96NU7 426 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 FCRL4Q96PJ5 515 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 OR2A5Q96R48 311 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ZNF347Q96SE7 839 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 DOHHQ9BU89 302 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 SPATA5L1Q9BVQ7 753 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 EPB41L1Q9H4G0 881 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 GLIPR2Q9H4G4 154 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 CXorf36Q9H7Y0 433 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 REEP1Q9H902 201 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 LYRM4Q9HD34 91 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ZCCHC3Q9NUD5 404 aaKnown RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 IFT80Q9P2H3 777 aaPredicted RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 PDP2Q9P2J9 529 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 EPHA6Q9UF33 1036 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 SLC13A4Q9UKG4 626 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ACSL6Q9UKU0 697 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 MRPS33Q9Y291 106 aaKnown RBP8.77□□□□□ -1.01
SS18-220ENST00000582092 MSRB2Q9Y3D2 182 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 ATG4BQ9Y4P1 393 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 PCDHGA1Q9Y5H4 931 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 KLK4Q9Y5K2 254 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 CSNK1G3Q9Y6M4 447 aa8.77□□□□□ -1.01
SS18-220ENST00000582092 HEATR5BQ9P2D3 2071 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 LOC105369274A0A096LPK9 316 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 LOC102723532A0A0G2JNH3 316 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PDLIM1O00151 329 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 SOCS2O14508 198 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PGRMC2O15173 223 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PPM1DO15297 605 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 HYAL3O43820 417 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 CTSVO60911 334 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 CAPNS1P04632 268 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 FHP07954 510 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 C8orf89P0DMQ9 161 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 ARAFP10398 606 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 ZNF26P17031 533 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 CAPZBP47756 277 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 XKP51811 444 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 RAD23AP54725 363 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 EPHA4P54764 986 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 SELENOWP63302 87 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 DAB2P98082 770 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 E2F1Q01094 437 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 IL1RL1Q01638 556 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TNFRSF17Q02223 184 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 BNIP3Q12983 259 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 ILKQ13418 452 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 MPEG1Q2M385 716 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 RFX4Q33E94 735 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 CCDC157Q569K6 752 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TCTE1Q5JU00 501 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms