RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CNRIP1Q96F85 164 aaPredicted RBP13.38□□□□□ -0.27
SKA2-205ENST00000580541 ITCHQ96J02 903 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 ZNF681Q96N22 645 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 NMUR2Q9GZQ4 415 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 ZNF385DQ9H6B1 395 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 C3orf14Q9HBI5 128 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 NEUROD4Q9HD90 331 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.38□□□□□ -0.27
SKA2-205ENST00000580541 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 URB1O60287 2271 aaKnown RBP13.38□□□□□ -0.27
SKA2-205ENST00000580541 A0A1W2PP18 115 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 MED19A0JLT2 244 aaPredicted RBP13.37□□□□□ -0.27
SKA2-205ENST00000580541 WASHC1A8K0Z3 465 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 ANGPT2O15123 496 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 IFI6P09912 130 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 F8A1P23610 371 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
SKA2-205ENST00000580541 FRKP42685 505 aaPredicted RBP13.37□□□□□ -0.27
SKA2-205ENST00000580541 RRADP55042 308 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 ID2Q02363 134 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 CYLC2Q14093 348 aaPredicted RBP13.37□□□□□ -0.27
SKA2-205ENST00000580541 RCAN2Q14206 197 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 EXT1Q16394 746 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 SFT2D3Q587I9 215 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 SPANXN4Q5MJ08 99 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 OR4F3Q6IEY1 312 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 ANKRD26P1Q6NSI1 321 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 UNQ6494/PRO21346Q6UXR6 183 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 RIPOR1Q6ZS17 1223 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 MORN4Q8NDC4 146 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 TSLPQ969D9 159 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 UCN3Q969E3 161 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 TEX37Q96LM6 180 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 AMDHD1Q96NU7 426 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 COPS7AQ9UBW8 275 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 CFL2Q9Y281 166 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 NDUFAF1Q9Y375 327 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 ACACAQ13085 2346 aa13.37□□□□□ -0.27
SKA2-205ENST00000580541 NSG1A0A0A6YYJ2 146 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 BBIP1A8MTZ0 92 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 C17orf105B2RV13 164 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 NR5A2O00482 541 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
SKA2-205ENST00000580541 SOX30O94993 753 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 ANP32DO95626 131 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 IL12AP29459 219 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 PRDX6P30041 224 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 TRPC1P48995 793 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 MNAT1P51948 309 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 RPS18P62269 152 aaKnown RBP13.36□□□□□ -0.27
SKA2-205ENST00000580541 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
SKA2-205ENST00000580541 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 CPZQ66K79 652 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 VASH2Q86V25 355 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 GALNT12Q8IXK2 581 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 OR7G1Q8NGA0 311 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 MOAP1Q96BY2 351 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 ZNF700Q9H0M5 742 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 MYLK2Q9H1R3 596 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 GLIPR2Q9H4G4 154 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 TAS2R9Q9NYW1 312 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
SKA2-205ENST00000580541 HS3ST3B1Q9Y662 390 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
SKA2-205ENST00000580541 A0A087WV62 115 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 A0A1W2PQ72 361 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 SAGE2PA6NJ88 616 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 PLOD2O00469 737 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 RFXANKO14593 260 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 HPP00738 406 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 NPPAP01160 153 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 DGKQP52824 942 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 PRR5P85299 388 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 ZNF267Q14586 743 aaPredicted RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 VPS26BQ4G0F5 336 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 ZNF385BQ569K4 471 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 KIRREL2Q6UWL6 708 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 FUNDC1Q8IVP5 155 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 VWA5B2Q8N398 1253 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 TMEM102Q8N9M5 508 aaPredicted RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 OR11G2Q8NGC1 345 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 OR4A15Q8NGL6 344 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 OR9I1Q8NGQ6 314 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 CIDECQ96AQ7 238 aaPredicted RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 PPWD1Q96BP3 646 aaKnown RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 CCDC115Q96NT0 180 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms