RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 MED18Q9BUE0 208 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 RAB17Q9H0T7 212 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 SYBUQ9NX95 663 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 PSD3Q9NYI0 1048 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 FETUBQ9UGM5 382 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 SOX13Q9UN79 622 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 C15orf41Q9Y2V0 281 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
CSNK1D-211ENST00000579316 B3GALT2O43825 422 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 ACSL3O95573 720 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 CPN1P15169 458 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 SERPINB3P29508 390 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 CD79BP40259 229 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 STX4Q12846 297 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 SERTAD2Q14140 314 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 EFTUD2Q15029 972 aaKnown RBP eCLIP12.61□□□□□ -0.391e-6■■□□□ 11.5
CSNK1D-211ENST00000579316 NTRK2Q16620 822 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 KCTD19Q17RG1 926 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 FNDC7Q5VTL7 733 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF470Q6ECI4 717 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 PDIK1LQ8N165 341 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 FAM13CQ8NE31 585 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 MS4A6EQ96DS6 147 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 TUBA1CQ9BQE3 449 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 AIF1LQ9BQI0 150 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 ANGPTL4Q9BY76 406 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 TRIM31Q9BZY9 425 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 CCDC68Q9H2F9 335 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
CSNK1D-211ENST00000579316 A0A088AWK7 358 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 LRRC14BA6NHZ5 514 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 SNPHO15079 494 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 RAD51CO43502 376 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 SEC31AO94979 1220 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 SNX4O95219 450 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 LRATO95237 230 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 ACTL6AO96019 429 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 CTAGE8P0CG41 777 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 TNNI3P19429 210 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF10P21506 573 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 IVDP26440 423 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 HNRNPH1P31943 449 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 UGT2B10P36537 528 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 RPL21P46778 160 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 NAGLUP54802 743 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 LIM2P55344 173 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 RCN2Q14257 317 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 EIPR1Q53HC9 387 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 UGT3A1Q6NUS8 523 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 MILR1Q7Z6M3 343 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 CAND1Q86VP6 1230 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 CTAGE4Q8IX94 777 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 ZNF611Q8N823 705 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 CEP112Q8N8E3 955 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 ROBO4Q8WZ75 1007 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 UCN3Q969E3 161 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 CAVIN3Q969G5 261 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 ERP44Q9BS26 406 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 MAD1L1Q9Y6D9 718 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 TGP01266 2768 aa12.6□□□□□ -0.39
CSNK1D-211ENST00000579316 A0A0G2JN53 185 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 MYOCOSA0A1B0GUC4 107 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 A0A1W2PNV4 684 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 LRIT2A6NDA9 550 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 ERI3O43414 337 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 F7P08709 466 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 HIST1H2AGP0C0S8 130 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 HIST1H2ADP20671 130 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 SAT1P21673 171 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 MAGEA3P43357 314 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 AP1S2P56377 157 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 ARL4CP56559 192 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 ADPRMQ3LIE5 342 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 SCIMPQ6UWF3 145 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 NXPE4Q6UWF7 544 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 SH2D5Q6ZV89 423 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 PALM2Q8IXS6 379 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 KLHDC8AQ8IYD2 350 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 GCNT2Q8N0V5 402 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 C7orf57Q8NEG2 295 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 EEF1AKMT1Q8WVE0 214 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 ANKRD9Q96BM1 317 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 FBXL8Q96CD0 374 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 SENP5Q96HI0 755 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 HIST1H2AHQ96KK5 128 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 TSNARE1Q96NA8 513 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 SERINC2Q96SA4 455 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 HIST1H2AJQ99878 128 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 NAT9Q9BTE0 207 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 H2AFJQ9BTM1 129 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 G6PC3Q9BUM1 346 aa12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 FBXO6Q9NRD1 293 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-211ENST00000579316 WHRNQ9P202 907 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms