RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CT62P0C5K7 136 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 GFAPP14136 432 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 CRABP2P29373 138 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 SSTR4P31391 388 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 BSGP35613 385 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 ZFP36L2P47974 494 aaKnown RBP8.22□□□□□ -1.09
GGA3-207ENST00000578896 ART1P52961 327 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 TNFRSF17Q02223 184 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 MPEG1Q2M385 716 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 C1orf185Q5T7R7 199 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 DESI1Q6ICB0 168 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 SEM1Q6ZVN7 128 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 CYS1Q717R9 158 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 MAATS1Q7Z4T9 603 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 GOLGA7Q7Z5G4 137 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 MED12LQ86YW9 2145 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 ZZZ3Q8IYH5 903 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 PRR22Q8IZ63 422 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 PLD6Q8N2A8 252 aaKnown RBP8.22□□□□□ -1.09
GGA3-207ENST00000578896 NUBPLQ8TB37 319 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 PAQR8Q8TEZ7 354 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 UBTD2Q8WUN7 234 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 SPACA9Q96E40 222 aaPredicted RBP8.22□□□□□ -1.09
GGA3-207ENST00000578896 ACTR8Q9H981 624 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 SH2D2AQ9NP31 389 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 CPSF2Q9P2I0 782 aaKnown RBP8.22□□□□□ -1.09
GGA3-207ENST00000578896 RNF14Q9UBS8 474 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 CNOT11Q9UKZ1 510 aaKnown RBP8.22□□□□□ -1.09
GGA3-207ENST00000578896 ACOT9Q9Y305 439 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 ASB4Q9Y574 426 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
GGA3-207ENST00000578896 EXPH5Q8NEV8 1989 aa8.22□□□□□ -1.09
GGA3-207ENST00000578896 ROS1P08922 2347 aa8.21□□□□□ -1.09
GGA3-207ENST00000578896 ARID1AO14497 2285 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 PCNX3Q9H6A9 2034 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 A0A0A6YYD5 115 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 OR14I1A6ND48 311 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 FIGNL2A6NMB9 653 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 ACSL3O95573 720 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 AIFM1O95831 613 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 GSTA2P09210 222 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 FAM58BPP0C7Q3 252 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 TLX1P31314 330 aaPredicted RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 ARL1P40616 181 aaPredicted RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 AGFG1P52594 562 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 RIPPLY3P57055 190 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 SLC37A1P57057 533 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 FBXW4P57775 412 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 PLIN5Q00G26 463 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 GUCY2DQ02846 1103 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 GTF2H2Q13888 395 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 SETDB1Q15047 1291 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 EBPQ15125 230 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 HYAL4Q2M3T9 481 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 WLSQ5T9L3 541 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 MRM1Q6IN84 353 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 GTF2H2CQ6P1K8 395 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 CYP20A1Q6UW02 462 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 RNF111Q6ZNA4 994 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 RPS27LQ71UM5 84 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 SLC29A4Q7RTT9 530 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 ULK2Q8IYT8 1036 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 ST13P4Q8IZP2 240 aaPredicted RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 NAXEQ8NCW5 288 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 SLC22A8Q8TCC7 542 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 TANKQ92844 425 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 RIT1Q92963 219 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 SARAFQ96BY9 339 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 FBXL20Q96IG2 436 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 NSUN5Q96P11 429 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 GPR78Q96P69 363 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 WWTR1Q9GZV5 400 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 VPS11Q9H270 941 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 ZNF703Q9H7S9 590 aaPredicted RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 NOL11Q9H8H0 719 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 IPPKQ9H8X2 491 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 ZFP64Q9NPA5 681 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 SNX15Q9NRS6 342 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 TEX10Q9NXF1 929 aaPredicted RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 PHF11Q9UIL8 331 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 SLC6A5Q9Y345 797 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 UTP11Q9Y3A2 253 aaKnown RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 L3MBTL1Q9Y468 752 aa8.21□□□□□ -1.1
GGA3-207ENST00000578896 CHCHD2Q9Y6H1 151 aaPredicted RBP8.21□□□□□ -1.1
GGA3-207ENST00000578896 A0A096LPK6 155 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 C15orf38-AP3S2A0A0A6YYH1 394 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 C2orf92A0A1B0GVN3 265 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 C2orf72A6NCS6 295 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 SYNDIG1LA6NDD5 238 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 FOXO6A8MYZ6 492 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 OR7A17O14581 309 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 DYRK3O43781 588 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 SUSD5O60279 629 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 HCN1O60741 890 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 TRAPPC6AO75865 159 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 ZWINTO95229 277 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 NR2F6P10588 404 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 TSPAN8P19075 237 aa8.2□□□□□ -1.1
GGA3-207ENST00000578896 PTX3P26022 381 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms