RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ZNF24P17028 368 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 TNNI3P19429 210 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 CAPN3P20807 821 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 HSD3B2P26439 372 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 TPP2P29144 1249 aaPredicted RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 PPP2R1BP30154 601 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 TNFRSF17Q02223 184 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 ZNF468Q5VIY5 522 aaPredicted RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 LIPMQ5VYY2 423 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 RPS19BP1Q86WX3 136 aaKnown RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 KIF2BQ8N4N8 673 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 B3GNT7Q8NFL0 401 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 ELP5Q8TE02 316 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 PHF10Q8WUB8 498 aaKnown RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 C14orf79Q96F83 325 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 ZNF717Q9BY31 904 aaPredicted RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 C12orf65Q9H3J6 166 aaKnown RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 MID1IP1Q9NPA3 183 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 SENP1Q9P0U3 644 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 VPS29Q9UBQ0 182 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 VTI1BQ9UEU0 232 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 ATG4BQ9Y4P1 393 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 ASB4Q9Y574 426 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 CLCA3PQ9Y6N3 262 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 POLQO75417 2590 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 NCOA6Q14686 2063 aaPredicted RBP14.89□□□□□ -0.03
VAPA-204ENST00000577901 HIVEP1P15822 2718 aa14.89□□□□□ -0.03
VAPA-204ENST00000577901 E9PLN8 166 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 PRRG2O14669 202 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 RGS16O15492 202 aaPredicted RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 TMPRSS11DO60235 418 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 NME2P1O60361 137 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 LDB3O75112 727 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 GUCY1B2O75343 617 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 SPAG7O75391 227 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 ERLIN1O75477 346 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 CRCPO75575 148 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 GBAP04062 536 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 KLK1P06870 262 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 NME2P22392 152 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 CLCN2P51788 898 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 HNRNPH2P55795 449 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 ZNF844Q08AG5 666 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 CSTF3Q12996 717 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 ELAVL1Q15717 326 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 RNFT1Q5M7Z0 435 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 CCNYL2Q5T2Q4 361 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 MRM1Q6IN84 353 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 C3P1Q6ZMU1 363 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 C10orf107Q8IVU9 208 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 CHERPQ8IWX8 916 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 METTL4Q8N3J2 472 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 CPSF7Q8N684 471 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 GBP7Q8N8V2 638 aaPredicted RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 NFAM1Q8NET5 270 aaPredicted RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 CHTF18Q8WVB6 975 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 DAZLQ92904 295 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 DMRTA2Q96SC8 542 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 VKORC1Q9BQB6 163 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 MRPL1Q9BYD6 325 aaKnown RBP14.88□□□□□ -0.03
VAPA-204ENST00000577901 CLDN16Q9Y5I7 305 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 F8P00451 2351 aa14.88□□□□□ -0.03
VAPA-204ENST00000577901 A0A1W2PR48 441 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 TGFBR3LH3BV60 316 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 ADAM10O14672 748 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 TRIM13O60858 407 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 COX7A2P14406 83 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 CYB561P49447 251 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 MAPK12P53778 367 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 TLE4Q04727 773 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 C18orf63Q68DL7 685 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 FRMD7Q6ZUT3 714 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 FGD2Q7Z6J4 655 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 CDH24Q86UP0 819 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 ZNF227Q86WZ6 799 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 EID3Q8N140 333 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 OR14A16Q8NHC5 309 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 TCP10LQ8TDR4 215 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 CA5BP1Q8WTZ4 195 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 SREK1Q8WXA9 508 aaKnown RBP14.87□□□□□ -0.03
VAPA-204ENST00000577901 ANKRD9Q96BM1 317 aaPredicted RBP14.87□□□□□ -0.03
VAPA-204ENST00000577901 VMP1Q96GC9 406 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 RBM18Q96H35 190 aaKnown RBP14.87□□□□□ -0.03
VAPA-204ENST00000577901 DGAT2Q96PD7 388 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 FAM111AQ96PZ2 611 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 DEFB126Q9BYW3 111 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 ENKD1Q9H0I2 346 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 PPIEQ9UNP9 301 aaKnown RBP14.87□□□□□ -0.03
VAPA-204ENST00000577901 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 PKDREJQ9NTG1 2253 aa14.87□□□□□ -0.03
VAPA-204ENST00000577901 UBFD1O14562 309 aaKnown RBP14.86□□□□□ -0.03
VAPA-204ENST00000577901 DYRK3O43781 588 aa14.86□□□□□ -0.03
VAPA-204ENST00000577901 NR2F6P10588 404 aa14.86□□□□□ -0.03
VAPA-204ENST00000577901 TRHRP34981 398 aaPredicted RBP14.86□□□□□ -0.03
VAPA-204ENST00000577901 PTGER1P34995 402 aa14.86□□□□□ -0.03
VAPA-204ENST00000577901 MLF1P58340 268 aa14.86□□□□□ -0.03
VAPA-204ENST00000577901 FOLH1Q04609 750 aa14.86□□□□□ -0.03
VAPA-204ENST00000577901 PCLAFQ15004 111 aa14.86□□□□□ -0.03
VAPA-204ENST00000577901 TESK1Q15569 626 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms