RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 PDPK1O15530 556 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 NCF2P19878 526 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 MPIP34949 423 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 CCL11P51671 97 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 SEC24CP53992 1094 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 CLNS1AP54105 237 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 SLC26A5P58743 744 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 ZNF267Q14586 743 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 TERF2Q15554 542 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 ZNF750Q32MQ0 723 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 PGS1Q32NB8 556 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 CPZQ66K79 652 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 KBTBD2Q8IY47 623 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 ZFP28Q8NHY6 868 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 DOK4Q8TEW6 326 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 CRELD1Q96HD1 420 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 ART5Q96L15 291 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 IMMP1LQ96LU5 166 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 WDR77Q9BQA1 342 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 OR8D2Q9GZM6 311 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 PRORYQ9H606 182 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 TAS2R7Q9NYW3 318 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 KLHL14Q9P2G3 628 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 ATP6V1HQ9UI12 483 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 EXO1Q9UQ84 846 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 KCNMB2Q9Y691 235 aa13.56□□□□□ -0.24
NPLOC4-218ENST00000574964 TNRC6AQ8NDV7 1962 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 A0A1W2PQ72 361 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 A0A1W2PS29 197 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 A6NL46 340 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 TBX19O60806 448 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 SERPINA7P05543 415 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 GALNSP34059 522 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 CLCN2P51788 898 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 NCBP2P52298 156 aaKnown RBP eCLIP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 UFM1P61960 85 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 PDE7AQ13946 482 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 TBR1Q16650 682 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 PDCD4Q53EL6 469 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 PLAG1Q6DJT9 500 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 GALNT12Q8IXK2 581 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 MIER2Q8N344 545 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 NATD1Q8N6N6 113 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 MORN4Q8NDC4 146 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 B3GNT7Q8NFL0 401 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 M1APQ8TC57 530 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 PTPMT1Q8WUK0 201 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 STON2Q8WXE9 905 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 ZBED6CLQ96FA7 236 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 VMP1Q96GC9 406 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 THOC3Q96J01 351 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 ZNF681Q96N22 645 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 ELAC2Q9BQ52 826 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 KCNK13Q9HB14 408 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 COPS7AQ9UBW8 275 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 GPR45Q9Y5Y3 372 aa13.55□□□□□ -0.24
NPLOC4-218ENST00000574964 FREM2Q5SZK8 3169 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 MYO1GB0I1T2 1018 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 SLC22A3O75751 556 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 ITGB2P05107 769 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 LAMP1P11279 417 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 GPC1P35052 558 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 MANFP55145 182 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 ZNF385BQ569K4 471 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 CGB2Q6NT52 195 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 APLFQ8IW19 511 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 GALNT16Q8N428 558 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 ADCY4Q8NFM4 1077 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 SLC2A12Q8TD20 617 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 EXTL1Q92935 676 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 NCLNQ969V3 563 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 CIDECQ96AQ7 238 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 ZNF764Q96H86 408 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 DEFB126Q9BYW3 111 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 LHPPQ9H008 270 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 CXorf21Q9HAI6 301 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 MMP25Q9NPA2 562 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 ZIM2Q9NZV7 527 aa13.54□□□□□ -0.24
NPLOC4-218ENST00000574964 DMXL2Q8TDJ6 3036 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 TRBV11-1A0A0K0K1C0 115 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 A8MUI8 341 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 CFLARO15519 480 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 DNAJB5O75953 348 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 ATP1B1P05026 303 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 CELA2AP08217 269 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 S100A3P33764 101 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 PTGER1P34995 402 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 C21orf58P58505 322 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 RHDQ02161 417 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 DUSP2Q05923 314 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 LTB4RQ15722 352 aa13.53□□□□□ -0.24
NPLOC4-218ENST00000574964 CEBPEQ15744 281 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms