RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 FEN1P39748 380 aaKnown RBP15.98■□□□□ 0.15
NUP88-210ENST00000574867 RRADP55042 308 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 NME5P56597 212 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 VAC14Q08AM6 782 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 ZNF385BQ569K4 471 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 ATP1A1-AS1Q5TC04 95 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 C6orf163Q5TEZ5 329 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 OR8J2Q8NGG1 315 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 ZFP28Q8NHY6 868 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 ZBED6CLQ96FA7 236 aaPredicted RBP15.98■□□□□ 0.15
NUP88-210ENST00000574867 FER1L6-AS2Q96M78 137 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 WDR77Q9BQA1 342 aaPredicted RBP15.98■□□□□ 0.15
NUP88-210ENST00000574867 MESP1Q9BRJ9 268 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 ZNF385DQ9H6B1 395 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 MAN2B2Q9Y2E5 1009 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 CLCA3PQ9Y6N3 262 aa15.98■□□□□ 0.15
NUP88-210ENST00000574867 CROCCQ5TZA2 2017 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 SEC24DO94855 1032 aaPredicted RBP15.97■□□□□ 0.15
NUP88-210ENST00000574867 SLITRK5O94991 958 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 FRKP42685 505 aaPredicted RBP15.97■□□□□ 0.15
NUP88-210ENST00000574867 KIR3DL1P43629 444 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 EXT1Q16394 746 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 SPRED3Q2MJR0 410 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 TMEM102Q8N9M5 508 aaPredicted RBP15.97■□□□□ 0.15
NUP88-210ENST00000574867 ART5Q96L15 291 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 CCT8L2Q96SF2 557 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 DUSP26Q9BV47 211 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 ACSS1Q9NUB1 689 aaPredicted RBP15.97■□□□□ 0.15
NUP88-210ENST00000574867 ZMIZ1Q9ULJ6 1067 aa15.97■□□□□ 0.15
NUP88-210ENST00000574867 ANKRD11Q6UB99 2663 aaPredicted RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 IGHV3-20A0A0C4DH32 117 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 MYOCOSA0A1B0GUC4 107 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 A0A1W2PS29 197 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 C17orf105B2RV13 164 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 LAMP1P11279 417 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 TNNI3P19429 210 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 GPX3P22352 226 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 PRSS53Q2L4Q9 553 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 ZNF750Q32MQ0 723 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 FAM180BQ6P0A1 224 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 PIGWQ7Z7B1 504 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 GALNT12Q8IXK2 581 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 CPSF7Q8N684 471 aaKnown RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 SUN3Q8TAQ9 357 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 PTPMT1Q8WUK0 201 aaPredicted RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 SNRNP27Q8WVK2 155 aaKnown RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 RIT1Q92963 219 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 TEX37Q96LM6 180 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 CPNE5Q9HCH3 593 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 PCSK5Q92824 1860 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 ICAM2P13598 275 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 NCBP2P52298 156 aaKnown RBP eCLIP15.96■□□□□ 0.15
NUP88-210ENST00000574867 AP2B1P63010 937 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 MPEG1Q2M385 716 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 PGS1Q32NB8 556 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 FAM174BQ3ZCQ3 159 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 DCAF10Q5QP82 559 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 MORN4Q8NDC4 146 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 ZNF675Q8TD23 568 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 CIDECQ96AQ7 238 aaPredicted RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 PPWD1Q96BP3 646 aaKnown RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 IMMP1LQ96LU5 166 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 CXorf21Q9HAI6 301 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 ZNF160Q9HCG1 818 aa15.96■□□□□ 0.15
NUP88-210ENST00000574867 PPIEQ9UNP9 301 aaKnown RBP15.96■□□□□ 0.15
NUP88-210ENST00000574867 ACACBO00763 2458 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 FAM234BA2RU67 622 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 A8MUA0 341 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 IL6P05231 212 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 NT5EP21589 574 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 IL12AP29459 219 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 S100A3P33764 101 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 SLC26A5P58743 744 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 DUSP2Q05923 314 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 MLC1Q15049 377 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 SPANXN4Q5MJ08 99 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 GKAP1Q5VSY0 366 aaPredicted RBP15.95■□□□□ 0.14
NUP88-210ENST00000574867 ANXA8L1Q5VT79 327 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 PLAG1Q6DJT9 500 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 PAOXQ6QHF9 649 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 CCDC116Q8IYX3 515 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 CLEC1AQ8NC01 280 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 VPS37AQ8NEZ2 397 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 B3GNT7Q8NFL0 401 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 AMDHD1Q96NU7 426 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 FAM120CQ9NX05 1096 aaKnown RBP15.95■□□□□ 0.14
NUP88-210ENST00000574867 CELSR3Q9NYQ7 3312 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 CCDC22O60826 627 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 IFI6P09912 130 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 POLR2JP52435 117 aaKnown RBP15.95■□□□□ 0.14
NUP88-210ENST00000574867 LRRC74AQ0VAA2 488 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 AIMP2Q13155 320 aaKnown RBP15.95■□□□□ 0.14
NUP88-210ENST00000574867 RCAN2Q14206 197 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 PRICKLE4Q2TBC4 344 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 OR9I1Q8NGQ6 314 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 ERP27Q96DN0 273 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 FBXL20Q96IG2 436 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 GLIPR2Q9H4G4 154 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 SLAMF7Q9NQ25 335 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 COPS7AQ9UBW8 275 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms