RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TM4SF18Q96CE8 201 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 CNPPD1Q9BV87 410 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 PARD6BQ9BYG5 372 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 TNFRSF12AQ9NP84 129 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 SEC14L3Q9UDX4 400 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 MCM8Q9UJA3 840 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 CES1P1Q9UKY3 287 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 ERVK-19Q9WJR5 959 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 SLC5A6Q9Y289 635 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 KLF13Q9Y2Y9 288 aaPredicted RBP12.08□□□□□ -0.48
CNOT1-220ENST00000569916 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
CNOT1-220ENST00000569916 POLEQ07864 2286 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 CROCCQ5TZA2 2017 aa12.08□□□□□ -0.48
CNOT1-220ENST00000569916 C1orf226A1L170 272 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SERTM1A2A2V5 107 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 WIPF3A6NGB9 483 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 A8MVJ9 347 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 GUCY1B2O75343 617 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 STSP08842 583 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 MEOX1P50221 254 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SLC37A1P57057 533 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 TRA2BP62995 288 aaKnown RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 RAE1P78406 368 aaKnown RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 HMGCS1Q01581 520 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ALDH6A1Q02252 535 aaKnown RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ASPHQ12797 758 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF267Q14586 743 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 EBPQ15125 230 aaKnown RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 MPEG1Q2M385 716 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF750Q32MQ0 723 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 C4orf17Q53FE4 359 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SPIN4Q56A73 249 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 CFAP157Q5JU67 520 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SCIMPQ6UWF3 145 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 IL20RBQ6UXL0 311 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 C10orf107Q8IVU9 208 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SULF2Q8IWU5 870 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 GALNT12Q8IXK2 581 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SRRM1Q8IYB3 904 aaKnown RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 PSD4Q8NDX1 1056 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 RIT1Q92963 219 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 C11orf24Q96F05 449 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 APIPQ96GX9 242 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 GPR137Q96N19 417 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ROPN1BQ9BZX4 212 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 CXorf21Q9HAI6 301 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ROPN1Q9HAT0 212 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-220ENST00000569916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.489e-14■□□□□ 10.9
CNOT1-220ENST00000569916 HPF1Q9NWY4 346 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 MID2Q9UJV3 735 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 PLLPQ9Y342 182 aa12.07□□□□□ -0.48
CNOT1-220ENST00000569916 USP9YO00507 2555 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-220ENST00000569916 UTP20O75691 2785 aaKnown RBP12.06□□□□□ -0.48
CNOT1-220ENST00000569916 CCDC151A5D8V7 595 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 H3BQF6 201 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 PCDH7O60245 1069 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 NADKO95544 446 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-220ENST00000569916 CT62P0C5K7 136 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 CPMP14384 443 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 ZNF24P17028 368 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 SSTR4P31391 388 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 TIA1P31483 386 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNOT1-220ENST00000569916 XKP51811 444 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 GPR85P60893 370 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 PIGGQ5H8A4 983 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 RNF111Q6ZNA4 994 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 TMEM109Q9BVC6 243 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 FAIM2Q9BWQ8 316 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 GATA5Q9BWX5 397 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-220ENST00000569916 WWTR1Q9GZV5 400 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 IQCGQ9H095 443 aaKnown RBP12.06□□□□□ -0.48
CNOT1-220ENST00000569916 TIMMDC1Q9NPL8 285 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 DEPPQ9NTK1 212 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 SLC17A7Q9P2U7 560 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 HEY2Q9UBP5 337 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 RAB21Q9UL25 225 aa12.06□□□□□ -0.48
CNOT1-220ENST00000569916 OR6C76A6NM76 312 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 NPIPA5E9PKD4 350 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 KLRC4-KLRK1H3BQV0 150 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 LRRTM2O43300 516 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 PEX1O43933 1283 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 SPAG7O75391 227 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 ERAL1O75616 437 aaKnown RBP12.05□□□□□ -0.48
CNOT1-220ENST00000569916 ATP1B1P05026 303 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 PORP16435 677 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-220ENST00000569916 SERPINB3P29508 390 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 DUSP2Q05923 314 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 ACSM2AQ08AH3 577 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 FUT7Q11130 342 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 C1QL3Q5VWW1 255 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 ACSM2BQ68CK6 577 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 GALNT18Q6P9A2 607 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 OPN5Q6U736 354 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 RTL4Q6ZR62 310 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 SLC29A4Q7RTT9 530 aa12.05□□□□□ -0.48
CNOT1-220ENST00000569916 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms