RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 FAM98BQ52LJ0 330 aaKnown RBP10.34□□□□□ -0.75
CLK3-226ENST00000569406 SGO1Q5FBB7 561 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 LRRC66Q68CR7 880 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 THEM5Q8N1Q8 247 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 BOLLQ8N9W6 283 aaKnown RBP10.34□□□□□ -0.75
CLK3-226ENST00000569406 TMEM145Q8NBT3 493 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 CHST14Q8NCH0 376 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ATP6V1C2Q8NEY4 427 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 OR11H7Q8NGC8 314 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ROPN1LQ96C74 230 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ZIC5Q96T25 663 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ACE2Q9BYF1 805 aaPredicted RBP10.34□□□□□ -0.75
CLK3-226ENST00000569406 EPHA6Q9UF33 1036 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 CMAHPQ9Y471 501 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 TCRBV5S2A0A599 114 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ACOD1A6NK06 481 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ANXA2P2A6NMY6 339 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 D6RAR5 112 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ICOSLGO75144 302 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 SLC43A1O75387 559 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 H2AFB1P0C5Y9 115 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 H2AFB2P0C5Z0 115 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 MPIP34949 423 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 PBX3P40426 434 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 CLDN20P56880 219 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 IHHQ14623 411 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 CLEC14AQ86T13 490 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ANKRD46Q86W74 232 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 SPAG16Q8N0X2 631 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 OR2T35Q8NGX2 323 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 THAP6Q8TBB0 222 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ZBED6CLQ96FA7 236 aaPredicted RBP10.34□□□□□ -0.75
CLK3-226ENST00000569406 RDH12Q96NR8 316 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 PKP4Q99569 1192 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 COLEC11Q9BWP8 271 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ASPNQ9BXN1 380 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 GORASP2Q9H8Y8 452 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 C3orf14Q9HBI5 128 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 DNAJB11Q9UBS4 358 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 NDRG2Q9UN36 371 aaKnown RBP10.34□□□□□ -0.75
CLK3-226ENST00000569406 MMACHCQ9Y4U1 282 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 OR2W5A6NFC9 320 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 CD3EAPO15446 510 aaKnown RBP10.34□□□□□ -0.75
CLK3-226ENST00000569406 VPS26AO75436 327 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 SERPINA1P01009 418 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 FGF4P08620 206 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ADRB3P13945 408 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 GCGRP47871 477 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 RBP2P50120 134 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 LRRC32Q14392 662 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 ZNF460Q14592 562 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 KIAA1211LQ6NV74 962 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 CXCL17Q6UXB2 119 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 METTL9Q9H1A3 318 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 SLC28A3Q9HAS3 691 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 SPACA1Q9HBV2 294 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 OXSMQ9NWU1 459 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 KLHL9Q9P2J3 617 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 SH3BGRL2Q9UJC5 107 aa10.34□□□□□ -0.75
CLK3-226ENST00000569406 LOC105369274A0A096LPK9 316 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 TUBAL3A6NHL2 446 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ARVCFO00192 962 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 TNFRSF10BO14763 440 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 SDC3O75056 442 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 HPRP00739 348 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 JCHAINP01591 159 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ENGP17813 658 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 CRISP3P54108 245 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 CSHL1Q14406 222 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.76
CLK3-226ENST00000569406 LIPMQ5VYY2 423 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ARHGAP12Q8IWW6 846 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 OR4N4Q8N0Y3 316 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 MEIOBQ8N635 442 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ZNF321PQ8N8H1 164 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 OR5T3Q8NGG3 340 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 SCAMP5Q8TAC9 235 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 SPPL2BQ8TCT7 592 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ZNF675Q8TD23 568 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 EDEM1Q92611 657 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 H2AFJQ9BTM1 129 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 FOLH1BQ9HBA9 442 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 CASTOR2A6NHX0 329 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 PHYHO14832 338 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ANKRD28O15084 1053 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 PSMD3O43242 534 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 SLC7A4O43246 635 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 SOX15O60248 233 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 AP2A1O95782 977 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 ALPIP09923 528 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 PGAM1P18669 254 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 RAB4AP20338 218 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 APEX1P27695 318 aaKnown RBP10.33□□□□□ -0.76
CLK3-226ENST00000569406 DIO1P49895 249 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 CCR6P51684 374 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 KCNAB1Q14722 419 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 REC114Q7Z4M0 266 aa10.33□□□□□ -0.76
CLK3-226ENST00000569406 KLBQ86Z14 1044 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms