RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	KDF1	Q8NAX2	398 aa	Predicted RBP	11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	CCDC197	Q8NCU1	140 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	VPS37A	Q8NEZ2	397 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	BCAS4	Q8TDM0	211 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	DAZL	Q92904	295 aa	Known RBP	11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	ERP27	Q96DN0	273 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	ART5	Q96L15	291 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	ZNF681	Q96N22	645 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	TUBB6	Q9BUF5	446 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	DUSP26	Q9BV47	211 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	NEUROD4	Q9HD90	331 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	SAR1A	Q9NR31	198 aa		11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	FAM120C	Q9NX05	1096 aa	Known RBP	11.24	□□□□□ -0.61
FANCA-231	ENST00000568626	MRPS18B	Q9Y676	258 aa	Known RBP	11.24	□□□□□ -0.61
FANCA-231	ENST00000568626		A0A087WV48	116 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	OR2W5	A6NFC9	320 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	SAGE2P	A6NJ88	616 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	RNASET2	O00584	256 aa	Known RBP	11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	SOCS6	O14544	535 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	HP	P00738	406 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	PGR	P06401	933 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	LAMP1	P11279	417 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	COX6A1	P12074	109 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	NCBP2	P52298	156 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	POLR2J	P52435	117 aa	Known RBP	11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	TMPRSS3	P57727	454 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	ID2	Q02363	134 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	TLE3	Q04726	772 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	EEF1A2	Q05639	463 aa	Known RBP	11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	CDC20	Q12834	499 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	SFT2D3	Q587I9	215 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	SPANXN4	Q5MJ08	99 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	FAM69B	Q5VUD6	431 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	FAAH2	Q6GMR7	532 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	ANKRD26P1	Q6NSI1	321 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	PAPD4	Q6PIY7	484 aa	Known RBP	11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	PAOX	Q6QHF9	649 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	KIRREL2	Q6UWL6	708 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	CCDC81	Q6ZN84	652 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	NDUFAF7	Q7L592	441 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	GALNT12	Q8IXK2	581 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	OR7A2P	Q8NGA2	310 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	OR11G2	Q8NGC1	345 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	OR9I1	Q8NGQ6	314 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	ZNF675	Q8TD23	568 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	TSPEAR	Q8WU66	669 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	RIT1	Q92963	219 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	UCN3	Q969E3	161 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	FER1L6-AS2	Q96M78	137 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	DCBLD2	Q96PD2	775 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	NMUR2	Q9GZQ4	415 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	ZNF700	Q9H0M5	742 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.23	□□□□□ -0.61	1e-7	■□□□□ 10.5
FANCA-231	ENST00000568626	P4HTM	Q9NXG6	502 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	RAX	Q9Y2V3	346 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	CLCA3P	Q9Y6N3	262 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	CAPN7	Q9Y6W3	813 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	ZZEF1	O43149	2961 aa		11.23	□□□□□ -0.61
FANCA-231	ENST00000568626	IGHV1-45	A0A0A0MS14	117 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	NSG1	A0A0A6YYJ2	146 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	CDC14C	A4D256	554 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	C17orf105	B2RV13	164 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	FCHO1	O14526	889 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	CFLAR	O15519	480 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	EFS	O43281	561 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	ICAM2	P13598	275 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	TNNI3	P19429	210 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	NT5E	P21589	574 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	FEN1	P39748	380 aa	Known RBP	11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	RRAD	P55042	308 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	SRSF6	Q13247	344 aa	Known RBP	11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	PCOLCE	Q15113	449 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	EXT1	Q16394	746 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	PGS1	Q32NB8	556 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	AGK	Q53H12	422 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	ZNF385B	Q569K4	471 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	BLOC1S3	Q6QNY0	202 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	MORN4	Q8NDC4	146 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	SUN3	Q8TAQ9	357 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	OR5P2	Q8WZ92	322 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	C8orf44	Q96CB5	159 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	SPDL1	Q96EA4	605 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	FBXL20	Q96IG2	436 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	TEX37	Q96LM6	180 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	AMDHD1	Q96NU7	426 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	RMND5A	Q9H871	391 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	CXorf21	Q9HAI6	301 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	PNO1	Q9NRX1	252 aa	Known RBP	11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	CCDC167	Q9P0B6	97 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	CCDC88C	Q9P219	2028 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	COPS7A	Q9UBW8	275 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	BTNL2	Q9UIR0	455 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	PPIE	Q9UNP9	301 aa	Known RBP	11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	POLH	Q9Y253	713 aa		11.22	□□□□□ -0.61
FANCA-231	ENST00000568626	SCN2A	Q99250	2005 aa		11.21	□□□□□ -0.61
FANCA-231	ENST00000568626	DMXL2	Q8TDJ6	3036 aa		11.21	□□□□□ -0.61
FANCA-231	ENST00000568626	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.21	□□□□□ -0.61
FANCA-231	ENST00000568626	PRSS51	A0A1B0GVH4	220 aa		11.21	□□□□□ -0.61
FANCA-231	ENST00000568626		A0A1W2PRB8	838 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms