RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SERPINF2P08697 491 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 PITPNBP48739 271 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 UNC50Q53HI1 259 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 ZNF506Q5JVG8 444 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 C1orf189Q5VU69 101 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 NKAIN2Q5VXU1 208 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 DLEU7Q6UYE1 221 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 GPR142Q7Z601 462 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 ITLN1Q8WWA0 313 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 SPAG8Q99932 426 aaPredicted RBP3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 ACAT2Q9BWD1 397 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 FUNDC2Q9BWH2 189 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 PUS3Q9BZE2 481 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 LRRCC1Q9C099 1032 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 HMG20BQ9P0W2 317 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 NARFQ9UHQ1 456 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 MRPS2Q9Y399 296 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 AUP1Q9Y679 476 aa3.73□□□□□ -1.81
SHCBP1-206ENST00000567698 FAM205AQ6ZU69 1335 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 RALGAPA1Q6GYQ0 2036 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 MEI4A8MW99 385 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 DUSP11O75319 330 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 SRSF10O75494 262 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 GMNNO75496 209 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 OAS1P00973 400 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 FCER2P06734 321 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 AREGP15514 252 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 STIP1P31948 543 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 CSRP3P50461 194 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 SLC8A3P57103 927 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 UBXN1Q04323 297 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 KLF5Q13887 457 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 KRT31Q15323 416 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 TMEM44Q2T9K0 475 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 ZNF528Q3MIS6 628 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 AGAP7PQ5VUJ5 663 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 SPINK14Q6IE38 97 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 CDC42EP5Q6NZY7 148 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 RAPH1Q70E73 1250 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 RABEPKQ7Z6M1 372 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 CDC20BQ86Y33 519 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 ERC1Q8IUD2 1116 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 ABCA7Q8IZY2 2146 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 OR52E1Q8NGJ3 308 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 COG3Q96JB2 828 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 ZNF560Q96MR9 790 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 CCDC43Q96MW1 224 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 Q9HAA7 133 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 AKAP7Q9P0M2 348 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 TRIM10Q9UDY6 481 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 CPQQ9Y646 472 aa3.72□□□□□ -1.81
SHCBP1-206ENST00000567698 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 MACROD2A1Z1Q3 448 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF840PA6NDX5 716 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 CCDC69A6NI79 296 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 FOXI3A8MTJ6 420 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF354AO60765 605 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 PDGFBP01127 241 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 SFTPBP07988 381 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 VDRP11473 427 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 P4HA1P13674 534 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ALDH3B1P43353 468 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 CCL11P51671 97 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 GEMP55040 296 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 RPS4XP62701 263 aaKnown RBP3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ARF5P84085 180 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 TSTA3Q13630 321 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 NHLRC3Q5JS37 347 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 LINC00242Q5T6M2 205 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 LIPJQ5W064 366 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 RTL6Q6ICC9 239 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 STEAP1BQ6NZ63 245 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 TMEM185AQ8NFB2 350 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 OR2L2Q8NH16 312 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 PSMA8Q8TAA3 256 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 TOMM40LQ969M1 308 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ACCSQ96QU6 501 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 STARD5Q9NSY2 213 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF581Q9P0T4 197 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 MLXQ9UH92 298 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 TDRKHQ9Y2W6 561 aaKnown RBP3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 ATG4BQ9Y4P1 393 aa3.71□□□□□ -1.82
SHCBP1-206ENST00000567698 A0A0A6YYD4 124 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 A0A1B0GTH9 108 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 TRIM64A6NGJ6 449 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 TRIM64BA6NI03 449 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 ERI2A8K979 691 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 SH2D1BO14796 132 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 MT-ND1P03886 318 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 HLA-DPA1P20036 260 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 PTPN4P29074 926 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 SPRP35270 261 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 NSFP46459 744 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 NDST1P52848 882 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 SLC12A3P55017 1021 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms