RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CLDN9O95484 217 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 C2P06681 752 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 TUBBP07437 444 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 RBP1P09455 135 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 SLC35E2P0CK97 266 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 CCL3P10147 92 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 CD1EP15812 388 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 IGFBP2P18065 325 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 DNASE1L1P49184 302 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 HCFC1P51610 2035 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 MRPS25P82663 173 aaKnown RBP17.17■□□□□ 0.34
LINC01238-205ENST00000567549 MYBPHQ13203 477 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 GTF2H2Q13888 395 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF791Q3KP31 576 aaPredicted RBP17.17■□□□□ 0.34
LINC01238-205ENST00000567549 MROH9Q5TGP6 573 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 TMEM198Q66K66 360 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 OR52E8Q6IFG1 317 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 GTF2H2CQ6P1K8 395 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 C9orf40Q8IXQ3 194 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 DMRTC2Q8IXT2 367 aaPredicted RBP17.17■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF321PQ8N8H1 164 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 OR5M9Q8NGP3 310 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 KCTD4Q8WVF5 259 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 DTNBP1Q96EV8 351 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 IPPKQ9H8X2 491 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 TUBA8Q9NY65 449 aaPredicted RBP17.17■□□□□ 0.34
LINC01238-205ENST00000567549 OTOGQ6ZRI0 2925 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 PINLYPA6NC86 204 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 TOXO94900 526 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 C1QAP02745 245 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 FAM58BPP0C7Q3 252 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 PIK3R1P27986 724 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 RPS13P62277 151 aaKnown RBP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 HERVK_113P63132 956 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ERVK-8P63133 956 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 FOXO1Q12778 655 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 DLG1Q12959 904 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF267Q14586 743 aaPredicted RBP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 UAP1Q16222 522 aaPredicted RBP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 CPSF6Q16630 551 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 EMC4Q5J8M3 183 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 C1orf185Q5T7R7 199 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 TTC19Q6DKK2 380 aaPredicted RBP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 C8orf74Q6P047 294 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 TMEM200AQ86VY9 491 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 OR4N5Q8IXE1 308 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 L3MBTL4Q8NA19 623 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 TP53INP1Q96A56 240 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF597Q96LX8 424 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 SECISBP2Q96T21 854 aaKnown RBP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 DOHHQ9BU89 302 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ERVK-6Q9BXR3 956 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ACKR4Q9NPB9 350 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ERVK-19Q9WJR5 959 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 CFL2Q9Y281 166 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ADGRG4Q8IZF6 3080 aa17.16■□□□□ 0.34
LINC01238-205ENST00000567549 ANKRD17O75179 2603 aaKnown RBP17.16■□□□□ 0.34
LINC01238-205ENST00000567549 EML6Q6ZMW3 1958 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 A0A096LPK6 155 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 C2orf92A0A1B0GVN3 265 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 ANKRD33BA6NCL7 494 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 NKX2-6A6NCS4 301 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 HSPB2A8KAH6 182 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 KLK8O60259 260 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 SMIM24O75264 130 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 FAM155BO75949 473 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 SNX4O95219 450 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 ZWINTO95229 277 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 FBXO45P0C2W1 286 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 MTHFD2P13995 350 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 KRT15P19012 456 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 GCKP35557 465 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 CCNG1P51959 295 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 HSPB2Q16082 182 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 TSNAXIP1Q2TAA8 658 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 RIPPLY2Q5TAB7 128 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 SPNS3Q6ZMD2 512 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 CCDC71Q8IV32 467 aaPredicted RBP17.15■□□□□ 0.34
LINC01238-205ENST00000567549 GALNT12Q8IXK2 581 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 PM20D2Q8IYS1 436 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 CENPLQ8N0S6 344 aaPredicted RBP17.15■□□□□ 0.34
LINC01238-205ENST00000567549 PPWD1Q96BP3 646 aaKnown RBP17.15■□□□□ 0.34
LINC01238-205ENST00000567549 WWTR1Q9GZV5 400 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF703Q9H7S9 590 aaPredicted RBP17.15■□□□□ 0.34
LINC01238-205ENST00000567549 NMRK1Q9NWW6 199 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 CPSF2Q9P2I0 782 aaKnown RBP17.15■□□□□ 0.34
LINC01238-205ENST00000567549 HRH3Q9Y5N1 445 aa17.15■□□□□ 0.34
LINC01238-205ENST00000567549 A0A0A6YYD5 115 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 A0A0G2JMM0 328 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 A0A1W2PPB8 328 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 A0A1W2PRS3 328 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 GOLGA6L10A6NI86 522 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 KIR3DP1A8MWS1 328 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 INHBAP08476 426 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 POU3F2P20265 443 aaPredicted RBP17.14■□□□□ 0.33
LINC01238-205ENST00000567549 PIGAP37287 484 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 SERPINB9P50453 376 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 HNRNPH2P55795 449 aaKnown RBP17.14■□□□□ 0.33
LINC01238-205ENST00000567549 SLC37A1P57057 533 aa17.14■□□□□ 0.33
LINC01238-205ENST00000567549 TFF3Q07654 80 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms