RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 PAMR1Q6UXH9 720 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 CAPN12Q6ZSI9 719 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 CHSY3Q70JA7 882 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 LRRC70Q7Z2Q7 622 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 IFT20Q8IY31 132 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 LAS2Q8IYD9 372 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 ZBED8Q8IZ13 594 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 TNIP2Q8NFZ5 429 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 DOK4Q8TEW6 326 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 FAM222BQ8WU58 562 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 RNASE6Q93091 150 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 LRRC46Q96FV0 321 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 TSPAN17Q96FV3 270 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 RBM18Q96H35 190 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 FBXL20Q96IG2 436 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 DOHHQ9BU89 302 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 ERVK-6Q9BXR3 956 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 TRIM31Q9BZY9 425 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 GSX1Q9H4S2 264 aaPredicted RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 RPF2Q9H7B2 306 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 DLL4Q9NR61 685 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 MS4A12Q9NXJ0 267 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 CNIH4Q9P003 139 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 CNOT11Q9UKZ1 510 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 RAB21Q9UL25 225 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 CBLCQ9ULV8 474 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 ERVK-19Q9WJR5 959 aa10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 UTP11Q9Y3A2 253 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 ZNF469Q96JG9 3925 aaPredicted RBP10.65□□□□□ -0.7
NSMCE1-209ENST00000565384 NCKAP5O14513 1909 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 IQANK1A0A1B0GTG1 560 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 FAM155BO75949 473 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 EPPINO95925 133 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 DRD2P14416 443 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 STMN1P16949 149 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 GDF1P27539 372 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 SERPINB3P29508 390 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 CEACAM8P31997 349 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 WNT3P56703 355 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 ADAM8P78325 824 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 CRYZQ08257 329 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 DUSP8Q13202 625 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 BIKQ13323 160 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 EBPQ15125 230 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 SPRED3Q2MJR0 410 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 FBXL19-AS1Q494R0 122 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 ACSF3Q4G176 576 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 C18orf63Q68DL7 685 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 OR4C11Q6IEV9 310 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 RNF111Q6ZNA4 994 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 SLC29A4Q7RTT9 530 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 CAMKMTQ7Z624 323 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 LACC1Q8IV20 430 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 ST13P4Q8IZP2 240 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 RNF175Q8N4F7 328 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 TANKQ92844 425 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 MBD6Q96DN6 1003 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 CMTM7Q96FZ5 175 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 ZNF597Q96LX8 424 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 CD244Q9BZW8 370 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 WWTR1Q9GZV5 400 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 OR51B5Q9H339 312 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 ARGLU1Q9NWB6 273 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 MTRF1LQ9UGC7 380 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 DMGDHQ9UI17 866 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 PHF11Q9UIL8 331 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 FOXD3Q9UJU5 478 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 RNF112Q9ULX5 631 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 RPH3AQ9Y2J0 694 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 ARHGAP21Q5T5U3 1957 aa10.64□□□□□ -0.71
NSMCE1-209ENST00000565384 CXorf49A8MYA2 514 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 OR10H2O60403 315 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 TRIM3O75382 744 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 C1QAP02745 245 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 RAF1P04049 648 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 TIMP3P35625 211 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 RAP1GDS1P52306 607 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 ZNF136P52737 540 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 HNRNPH2P55795 449 aaKnown RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 SLC37A1P57057 533 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 MRPS25P82663 173 aaKnown RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 GUCY2DQ02846 1103 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 DDX39BQ13838 428 aaKnown RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 ZNF267Q14586 743 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 DAZAP2Q15038 168 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 ZKSCAN8Q15776 578 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 NTRK2Q16620 822 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 DEPDC1Q5TB30 811 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 FBXW10Q5XX13 1052 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 TMEM198Q66K66 360 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 GRHL2Q6ISB3 625 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 POMZP3Q6PJE2 187 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 GPR180Q86V85 440 aa10.63□□□□□ -0.71
NSMCE1-209ENST00000565384 ZCCHC7Q8N3Z6 543 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms