RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GABRA1P14867 456 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 IGFBP2P18065 325 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 MAN2A2P49641 1150 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 CCNG1P51959 295 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 SLC37A1P57057 533 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 IRF9Q00978 393 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 UAP1Q16222 522 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 WHAMMP3Q1A5X7 153 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 OR52E8Q6IFG1 317 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 MEX3BQ6ZN04 569 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 RNF111Q6ZNA4 994 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 NCCRP1Q6ZVX7 275 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 PAGE2Q7Z2X7 111 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 NUDT13Q86X67 352 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 C9orf40Q8IXQ3 194 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 FBXW8Q8N3Y1 598 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 MYRIPQ8NFW9 859 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 OR5M3Q8NGP4 307 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 SLC44A1Q8WWI5 657 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 SECISBP2Q96T21 854 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 SORBS1Q9BX66 1292 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 VPS11Q9H270 941 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 NOL11Q9H8H0 719 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 TUBA8Q9NY65 449 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 ACAD8Q9UKU7 415 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 RNF11Q9Y3C5 154 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 TACC2O95359 2948 aa11.24□□□□□ -0.61
GTF3C1-204ENST00000564664 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 A0A0G2JMM0 328 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 C2orf92A0A1B0GVN3 265 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ATP6AP2A0A1C7CYW4 349 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 A0A1W2PPB8 328 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 A0A1W2PRS3 328 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 KIR3DP1A8MWS1 328 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 TP53I11O14683 189 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 TMPRSS11DO60235 418 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 SMIM24O75264 130 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 CDH16O75309 829 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 EEDO75530 441 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ATP6AP2O75787 350 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 KRT38O76015 456 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 TOXO94900 526 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 NADKO95544 446 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 CCL3P10147 92 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 PIK3R1P27986 724 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 MAGEA5P43359 124 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 MAGEA12P43365 314 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ZFP36L2P47974 494 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 NUP107P57740 925 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 HERVK_113P63132 956 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ERVK-8P63133 956 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 IFT88Q13099 833 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 NTRK2Q16620 822 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 GGTA1PQ4G0N0 100 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 TECRLQ5HYJ1 363 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 WLSQ5T9L3 541 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 FRG2Q64ET8 278 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 B3GNT6Q6ZMB0 384 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 DGAT2L6Q6ZPD8 337 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 CLYBLQ8N0X4 340 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 RNF175Q8N4F7 328 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 MMGT1Q8N4V1 131 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 OR7G1Q8NGA0 311 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 OR4K14Q8NGD5 310 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 MRRFQ96E11 262 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 FRG2BQ96QU4 278 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 TTYH2Q9BSA4 534 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 CNPPD1Q9BV87 410 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ERVK-6Q9BXR3 956 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 WWTR1Q9GZV5 400 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 PNPLA3Q9NST1 481 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 NMRK1Q9NWW6 199 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 NINJ2Q9NZG7 142 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ZNF180Q9UJW8 692 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 ERVK-19Q9WJR5 959 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 FBN2P35556 2912 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 OTOGQ6ZRI0 2925 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 CCDC168Q8NDH2 2452 aa11.23□□□□□ -0.61
GTF3C1-204ENST00000564664 G3V3Y1 287 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 OR7A17O14581 309 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 SNX4O95219 450 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 SIX3O95343 332 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 MSX1P28360 303 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 PIGAP37287 484 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 PEX19P40855 299 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 DNASE1L1P49184 302 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 TMED10P49755 219 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 NEK2P51955 445 aa11.22□□□□□ -0.61
GTF3C1-204ENST00000564664 NRG3P56975 720 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms