RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 AIM2O14862 343 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 FGF17O60258 216 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 B4GALT2O60909 372 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 NPPAP01160 153 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 PRB1P04280 392 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 CSNK2A2P19784 350 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 CD82P27701 267 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 RBMS1P29558 406 aaKnown RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 NTSP30990 170 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 GCKP35557 465 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 PGM1P36871 562 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 CPA2P48052 419 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 FOLH1Q04609 750 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 BIKQ13323 160 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 ERV3-1Q14264 604 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 VWA2Q5GFL6 755 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 PAGE3Q5JUK9 113 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 MRPL14Q6P1L8 145 aaKnown RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 SLC2A7Q6PXP3 512 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 C6orf15Q6UXA7 325 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 MARCH9Q86YJ5 346 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 SCUBE1Q8IWY4 988 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 RBM15BQ8NDT2 890 aaKnown RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 ZFP28Q8NHY6 868 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 STT3BQ8TCJ2 826 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 MR1Q95460 341 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 CNRIP1Q96F85 164 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 ZBED6CLQ96FA7 236 aaPredicted RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 BBS4Q96RK4 519 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 NPAS2Q99743 824 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 NRSN2Q9GZP1 204 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 SERHLQ9NQF3 203 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 CTSFQ9UBX1 484 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
SPG7-209ENST00000564047 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 KNTC1P50748 2209 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 SPTA1P02549 2419 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 A0A096LPI6 279 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 SYNDIG1LA6NDD5 238 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 C9J4A7 227 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 LDB3O75112 727 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 ERN1O75460 977 aaKnown RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 JRKO75564 520 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CDC123O75794 336 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 CIB2O75838 187 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CYC1P08574 325 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CD63P08962 238 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 ZGLP1P0C6A0 271 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CCNYL3P0C7X3 344 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CPMP14384 443 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 PORP16435 677 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 MPIP34949 423 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 FEN1P39748 380 aaKnown RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 TRPC1P48995 793 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 XKP51811 444 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 IGLV3-21P80748 117 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 SLC13A2Q13183 592 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 ART3Q13508 389 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 SERTAD2Q14140 314 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 NKG7Q16617 165 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 LRIF1Q5T3J3 769 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 MLIPQ5VWP3 458 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 LCN10Q6JVE6 187 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 HACD2Q6Y1H2 254 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 ANKRD46Q86W74 232 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 OR4N5Q8IXE1 308 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 LRRC25Q8N386 305 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 ESX1Q8N693 406 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 PLPP5Q8NEB5 264 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 ROPN1LQ96C74 230 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 AMDHD1Q96NU7 426 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 PANX1Q96RD7 426 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 CHST8Q9H2A9 424 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 GLIPR2Q9H4G4 154 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 WDR54Q9H977 334 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 AKIRIN1Q9H9L7 192 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 SLAMF7Q9NQ25 335 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 GID8Q9NWU2 228 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
SPG7-209ENST00000564047 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
SPG7-209ENST00000564047 A0A087WV48 116 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 TEX51A0A1B0GUA7 166 aa12.1□□□□□ -0.47
SPG7-209ENST00000564047 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms