RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ABCG4Q9H172 646 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 ADNPQ9H2P0 1102 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 NT5DC2Q9H857 520 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 ZNF446Q9NWS9 450 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 STRAPQ9Y3F4 350 aaKnown RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 AUP1Q9Y679 476 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 STYXL1Q9Y6J8 313 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 HCFC1P51610 2035 aa4.46□□□□□ -1.69
LINC00557-201ENST00000563184 SYCE3A1L190 88 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 BCLAF3A2AJT9 711 aaKnown RBP4.46□□□□□ -1.7
LINC00557-201ENST00000563184 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 SRRM5B3KS81 715 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 TXNL1O43396 289 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 TSPAN2O60636 221 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 DUSP11O75319 330 aaKnown RBP4.46□□□□□ -1.7
LINC00557-201ENST00000563184 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 KRT5P13647 590 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF18P17022 549 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 CAPN2P17655 700 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 PPP2R1AP30153 589 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 SLC1A4P43007 532 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 CCL11P51671 97 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 SLC12A3P55017 1021 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 STARD6P59095 220 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 ACY1Q03154 408 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 PPP1R8Q12972 351 aaKnown RBP4.46□□□□□ -1.7
LINC00557-201ENST00000563184 LIPJQ5W064 366 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 TATDN1Q6P1N9 297 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF841Q6ZN19 808 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 C4orf32Q8N8J7 132 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 ANKRD27Q96NW4 1050 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 RUFY1Q96T51 708 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 SYTL2Q9HCH5 934 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 ANO10Q9NW15 660 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 FAM153AQ9UHL3 310 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 RARRES3Q9UL19 164 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 DNPEPQ9ULA0 475 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 KLHDC2Q9Y2U9 406 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 FBXO7Q9Y3I1 522 aa4.46□□□□□ -1.7
LINC00557-201ENST00000563184 A0A0U1RRA0 63 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 ACOD1A6NK06 481 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 CHEK1O14757 476 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 SH2D1BO14796 132 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 NME2P1O60361 137 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 HSF2BPO75031 334 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 FCER2P06734 321 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 GATA1P15976 413 aaPredicted RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 STMN1P16949 149 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 IL4RP24394 825 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 MARCKSP29966 332 aaPredicted RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 TRIM23P36406 574 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 ATP6V1E1P36543 226 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 NLRP11P59045 1033 aaKnown RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 RPS4XP62701 263 aaKnown RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 COX10Q12887 443 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 KLF5Q13887 457 aaPredicted RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 TRADDQ15628 312 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 HERC4Q5GLZ8 1057 aaPredicted RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 RAB12Q6IQ22 244 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 STEAP1BQ6NZ63 245 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 GPR142Q7Z601 462 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 CCNYQ8ND76 341 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 KIAA1524Q8TCG1 905 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 SLC13A3Q8WWT9 602 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 NTNG2Q96CW9 530 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 TMEM237Q96Q45 408 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 HSD17B14Q9BPX1 270 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 LRRCC1Q9C099 1032 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 DDX47Q9H0S4 455 aaKnown RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 VPS54Q9P1Q0 977 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 COPS7AQ9UBW8 275 aa4.45□□□□□ -1.7
LINC00557-201ENST00000563184 RPH3AQ9Y2J0 694 aaPredicted RBP4.45□□□□□ -1.7
LINC00557-201ENST00000563184 TEX48A0A1B0GUV7 120 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 TMEM89A2RUT3 159 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 SLC4A1P02730 911 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 CXCL10P02778 98 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 GATA2P23769 480 aaPredicted RBP4.44□□□□□ -1.7
LINC00557-201ENST00000563184 MAT2AP31153 395 aaKnown RBP4.44□□□□□ -1.7
LINC00557-201ENST00000563184 ACADSBP45954 432 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 CDC37Q16543 378 aaPredicted RBP4.44□□□□□ -1.7
LINC00557-201ENST00000563184 PCK2Q16822 640 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 UNC50Q53HI1 259 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 RHBDD2Q6NTF9 364 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 EMBQ6PCB8 327 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 BNIPLQ7Z465 357 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 ADGRD2Q7Z7M1 963 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 BATF2Q8N1L9 274 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 ZNF491Q8N8L2 437 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 ARL10Q8N8L6 244 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 CSNK1G2-AS1Q8NCQ2 148 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 ICA1LQ8NDH6 482 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 OR4Q3Q8NH05 313 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 FAM222BQ8WU58 562 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 RASL10AQ92737 203 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 C16orf58Q96GQ5 468 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 Q9HAA7 133 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 MOSPD1Q9UJG1 213 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 SLC6A5Q9Y345 797 aa4.44□□□□□ -1.7
LINC00557-201ENST00000563184 PTPRUQ92729 1446 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms