RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ZFAND5O76080 213 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 F10P00742 488 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 PIK3R1P27986 724 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 SERPINB3P29508 390 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 GSTM5P46439 218 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 TUBA3CQ13748 450 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 INAQ16352 499 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 IMPG1Q17R60 797 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 SPRED3Q2MJR0 410 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 GALNT18Q6P9A2 607 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 TUBA3EQ6PEY2 450 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 SCIMPQ6UWF3 145 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 OR8K3Q8NH51 312 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 SLC2A12Q8TD20 617 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 C11orf24Q96F05 449 aaPredicted RBP15.4■□□□□ 0.06
CDT1-202ENST00000562747 APIPQ96GX9 242 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 ART5Q96L15 291 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 UTP23Q9BRU9 249 aaKnown RBP15.4■□□□□ 0.06
CDT1-202ENST00000562747 FAIM2Q9BWQ8 316 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 SHCBP1LQ9BZQ2 653 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 OR8D2Q9GZM6 311 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 RRAGDQ9NQL2 400 aaPredicted RBP15.4■□□□□ 0.06
CDT1-202ENST00000562747 COPS7AQ9UBW8 275 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 PCDHA9Q9Y5H5 950 aa15.4■□□□□ 0.06
CDT1-202ENST00000562747 WASHC1A8K0Z3 465 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 OR10H2O60403 315 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 RSL1D1O76021 490 aaKnown RBP15.39■□□□□ 0.05
CDT1-202ENST00000562747 ZWINTO95229 277 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 CHEK2O96017 543 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 FGF4P08620 206 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 SLC35E2P0CK97 266 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 TIA1P31483 386 aaKnown RBP eCLIP15.39■□□□□ 0.05
CDT1-202ENST00000562747 CD96P40200 585 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 RAE1P78406 368 aaKnown RBP15.39■□□□□ 0.05
CDT1-202ENST00000562747 ARL13AQ5H913 290 aaPredicted RBP15.39■□□□□ 0.05
CDT1-202ENST00000562747 SPDYAQ5MJ70 313 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 KANK2Q63ZY3 851 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 CLEC6AQ6EIG7 209 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 SLC48A1Q6P1K1 146 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 HSDL2Q6YN16 418 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 HORMAD2Q8N7B1 307 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 OR4K14Q8NGD5 310 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 OR6Y1Q8NGX8 325 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 ZNF721Q8TF20 911 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 FAR1Q8WVX9 515 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 UCN3Q969E3 161 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 PPWD1Q96BP3 646 aaKnown RBP15.39■□□□□ 0.05
CDT1-202ENST00000562747 METTL2AQ96IZ6 378 aaKnown RBP15.39■□□□□ 0.05
CDT1-202ENST00000562747 CES1P1Q9UKY3 287 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 PSME2Q9UL46 239 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 ENTPD4Q9Y227 616 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 PCDHGB6Q9Y5F9 930 aa15.39■□□□□ 0.05
CDT1-202ENST00000562747 CSMD2Q7Z408 3487 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 ZGRF1Q86YA3 2104 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 GNG14A0A1W2PPG7 69 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 NPIPB8E9PQR5 432 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 SLC28A1O00337 649 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 BIRC5O15392 142 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 PRAMEF2O60811 474 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 IGKV3-11P04433 115 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 CHRNGP07510 517 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 EDN3P14138 238 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 PRPH2P23942 346 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 TRHRP34981 398 aaPredicted RBP15.38■□□□□ 0.05
CDT1-202ENST00000562747 SERPINB4P48594 390 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 BTKQ06187 659 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 ZCCHC23Q6ZST2 131 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 CLYBLQ8N0X4 340 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 SLC34A3Q8N130 599 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 MDS2Q8NDY4 140 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 FAM76AQ8TAV0 307 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 RIT1Q92963 219 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 SENP5Q96HI0 755 aaPredicted RBP15.38■□□□□ 0.05
CDT1-202ENST00000562747 FBXL20Q96IG2 436 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 SLX1AQ9BQ83 275 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 TRIM45Q9H8W5 580 aaPredicted RBP15.38■□□□□ 0.05
CDT1-202ENST00000562747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDT1-202ENST00000562747 PDZD2O15018 2839 aa15.38■□□□□ 0.05
CDT1-202ENST00000562747 SVILO95425 2214 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 CNTRLQ7Z7A1 2325 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 GOLGA6L10A6NI86 522 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 HNRNPRO43390 633 aaKnown RBP15.37■□□□□ 0.05
CDT1-202ENST00000562747 RGS14O43566 566 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 PRKNO60260 465 aaPredicted RBP15.37■□□□□ 0.05
CDT1-202ENST00000562747 DHRS4L1P0CG22 281 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 NEFHP12036 1026 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 DRD2P14416 443 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 CYB561P49447 251 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 HLCSP50747 726 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 XKP51811 444 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 RNF4P78317 190 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 OC90Q02509 493 aaPredicted RBP15.37■□□□□ 0.05
CDT1-202ENST00000562747 CASP8Q14790 479 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 HEPACAMQ14CZ8 416 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 OR1C1Q15619 314 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 ZNF766Q5HY98 468 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 DGAT2L6Q6ZPD8 337 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 FJX1Q86VR8 437 aa15.37■□□□□ 0.05
CDT1-202ENST00000562747 ZNF321PQ8N8H1 164 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms