RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 UGT2B28Q9BY64 529 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 DDX47Q9H0S4 455 aaKnown RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 TEX10Q9NXF1 929 aaPredicted RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 EHD3Q9NZN3 535 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 CD274Q9NZQ7 290 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 ADAM21Q9UKJ8 722 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 ROS1P08922 2347 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 PRR14LQ5THK1 2151 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 SH3D21A4FU49 640 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 SIAH2O43255 324 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 OR10H2O60403 315 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 TRIM3O75382 744 aaPredicted RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 FBXO45P0C2W1 286 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 TMIGD3P0DMS9 266 aaPredicted RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 BMP7P18075 431 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 HIST1H1TP22492 207 aaPredicted RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 MRPS25P82663 173 aaKnown RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 CHIT1Q13231 466 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 SERTAD2Q14140 314 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 PDK4Q16654 411 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 MPEG1Q2M385 716 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 FNDC7Q5VTL7 733 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 RNF111Q6ZNA4 994 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 SLC29A4Q7RTT9 530 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 MAATS1Q7Z4T9 603 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 MYLK4Q86YV6 388 aaPredicted RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 LACC1Q8IV20 430 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 NKAPQ8N5F7 415 aaKnown RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 TTLQ8NG68 377 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 OR8K3Q8NH51 312 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 HSPBAP1Q96EW2 488 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 LRRC46Q96FV0 321 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 WDYHV1Q96HA8 205 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 MS4A8Q9BY19 250 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 TRIM31Q9BZY9 425 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 RPF2Q9H7B2 306 aaKnown RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 GALNT9Q9HCQ5 603 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 LYRM4Q9HD34 91 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 SMYD2Q9NRG4 433 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 EDARQ9UNE0 448 aa10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 MTO1Q9Y2Z2 717 aaKnown RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 RAI1Q7Z5J4 1906 aaPredicted RBP10.68□□□□□ -0.7
NSMCE1-202ENST00000561960 HIVEP2P31629 2446 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 STAB1Q9NY15 2570 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 IQANK1A0A1B0GTG1 560 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 C17orf51A8MQB3 221 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 FAM47E-STBD1D6RA91 191 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 PGRMC1O00264 195 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 EEDO75530 441 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 TTC4O95801 387 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 C1QAP02745 245 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 CT62P0C5K7 136 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 CCDC166P0CW27 439 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ALOX15P16050 662 aaPredicted RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 EPB42P16452 691 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 CTSSP25774 331 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 STARP49675 285 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 HNMTP50135 292 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 NAGLUP54802 743 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 NR1H2P55055 460 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 SLC37A1P57057 533 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 PLIN5Q00G26 463 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 IRF8Q02556 426 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 EBPQ15125 230 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 CYP1B1Q16678 543 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 AP5B1Q2VPB7 878 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ARMC3Q5W041 872 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 NSUN5P2Q63ZY6 315 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ADAMTSL2Q86TH1 951 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 TRIM58Q8NG06 486 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 NUBPLQ8TB37 319 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ZNF473Q8WTR7 871 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 PTCD3Q96EY7 689 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 RBM18Q96H35 190 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ZC3HAV1LQ96H79 300 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 PDLIM5Q96HC4 596 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 FBXL20Q96IG2 436 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 MTERF1Q99551 399 aaKnown RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 TUBA1CQ9BQE3 449 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 PHACTR1Q9C0D0 580 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 EHD1Q9H4M9 534 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ACKR4Q9NPB9 350 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 KLHL28Q9NXS3 571 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 ZNF629Q9UEG4 869 aaPredicted RBP10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 MAPRE3Q9UPY8 281 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 DTX4Q9Y2E6 619 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 CR1P17927 2039 aa10.67□□□□□ -0.7
NSMCE1-202ENST00000561960 USF3Q68DE3 2245 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 LRRC14BA6NHZ5 514 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 CXorf49A8MYA2 514 aaPredicted RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 AHRRA9YTQ3 701 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 SMPD2O60906 423 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 NME6O75414 186 aaPredicted RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 STK16O75716 305 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 CNTFP26441 200 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 SERPINB3P29508 390 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 TIMP3P35625 211 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms