RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ZSCAN26Q16670 478 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 RBM20Q5T481 1227 aaKnown RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 ANKRD22Q5VYY1 191 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 PAQR3Q6TCH7 311 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 NXPE4Q6UWF7 544 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 VN1R5Q7Z5H4 357 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 LUZP2Q86TE4 346 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 KLHDC8AQ8IYD2 350 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 MYO1HQ8N1T3 1032 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 AGGF1Q8N302 714 aaeCLIP9.07□□□□□ -0.96
TPM1-225ENST00000560679 OR5L2Q8NGL0 311 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 IGFBPL1Q8WX77 278 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 ISL2Q96A47 359 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 JSRP1Q96MG2 331 aaPredicted RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 TRIB1Q96RU8 372 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 AIF1LQ9BQI0 150 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 PIGQQ9BRB3 760 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 ALOXE3Q9BYJ1 711 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 GSX2Q9BZM3 304 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 UBQLN3Q9H347 655 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 CDC42EP4Q9H3Q1 356 aaKnown RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 C6orf203Q9P0P8 240 aaPredicted RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 FBXO5Q9UKT4 447 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 CNOT11Q9UKZ1 510 aaKnown RBP9.07□□□□□ -0.96
TPM1-225ENST00000560679 SLC6A5Q9Y345 797 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 SVEP1Q4LDE5 3571 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 DSCAMO60469 2012 aa9.07□□□□□ -0.96
TPM1-225ENST00000560679 HRKO00198 91 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 B3GALT2O43825 422 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 CTNSO60931 367 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 LDB3O75112 727 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 GUCA1CO95843 209 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 C1QAP02745 245 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 IGKV3-11P04433 115 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 FBXO45P0C2W1 286 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 TMIGD3P0DMS9 266 aaPredicted RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 GDF1P27539 372 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 SLCO1A2P46721 670 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 PTH2RP49190 550 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 CDK9P50750 372 aaKnown RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 AP1S2P56377 157 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 STXBP1P61764 594 aaKnown RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 CDK16Q00536 496 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 ID2Q02363 134 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 THOC5Q13769 683 aaKnown RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 ACKR1Q16570 336 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 NHSL2Q5HYW2 709 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 FNDC7Q5VTL7 733 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 ARMC3Q5W041 872 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 BICRALQ6AI39 1079 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 VASNQ6EMK4 673 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 ADNP2Q6IQ32 1131 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 CASC4Q6P4E1 433 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 PLXDC2Q6UX71 529 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 THOC6Q86W42 341 aaKnown RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 RELL1Q8IUW5 271 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 PALM2Q8IXS6 379 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 PM20D2Q8IYS1 436 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 NUBPLQ8TB37 319 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 NTNG2Q96CW9 530 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 WDYHV1Q96HA8 205 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 MARK4Q96L34 752 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 ZNF597Q96LX8 424 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 HS3ST6Q96QI5 342 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 DOHHQ9BU89 302 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 UGT2B28Q9BY64 529 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 STMN4Q9H169 189 aaPredicted RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 UBTD1Q9HAC8 227 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 NINJ2Q9NZG7 142 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 DAPP1Q9UN19 280 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 CAMK2AQ9UQM7 478 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 EIF3LQ9Y262 564 aaKnown RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 MRPS33Q9Y291 106 aaKnown RBP9.06□□□□□ -0.96
TPM1-225ENST00000560679 WIF1Q9Y5W5 379 aa9.06□□□□□ -0.96
TPM1-225ENST00000560679 EXPH5Q8NEV8 1989 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 SYNDIG1LA6NDD5 238 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 RGS16O15492 202 aaPredicted RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 ERN1O75460 977 aaKnown RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 TTC4O95801 387 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 HPNP05981 417 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 ABHD2P08910 425 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 LOXP28300 417 aaPredicted RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 GABRB3P28472 473 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 CCKARP32238 428 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 HPDP32754 393 aaPredicted RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 MDH1P40925 334 aaKnown RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 MAGEA6P43360 314 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 PLA2G16P53816 162 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 MAGOHP61326 146 aaKnown RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 GPS1Q13098 491 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 MORF4L2Q15014 288 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 PPP1R3AQ16821 1122 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 ADPRMQ3LIE5 342 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 UBAP2Q5T6F2 1119 aaKnown RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 RNASEH2BQ5TBB1 312 aaKnown RBP9.05□□□□□ -0.96
TPM1-225ENST00000560679 HMBOX1Q6NT76 420 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 SBSNQ6UWP8 590 aa9.05□□□□□ -0.96
TPM1-225ENST00000560679 DGAT2L6Q6ZPD8 337 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms