RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TIMP3P35625 211 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 STT3AP46977 705 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 HSPA7P48741 367 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 IRF8Q02556 426 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 CRYZQ08257 329 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 DDX39BQ13838 428 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 DOC2AQ14183 400 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF267Q14586 743 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 PDK4Q16654 411 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ADPRMQ3LIE5 342 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 RNASEH2BQ5TBB1 312 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 HLA-DQA1Q5Y7H0 255 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 NSUN5P2Q63ZY6 315 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TRMT10BQ6PF06 316 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TMEM64Q6YI46 380 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF793Q6ZN11 406 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 VN1R5Q7Z5H4 357 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 GALNT7Q86SF2 657 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 DND1Q8IYX4 353 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TAGAPQ8N103 731 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 SLC15A4Q8N697 577 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ACOT4Q8N9L9 421 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 ANKRD9Q96BM1 317 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 RHBDF1Q96CC6 855 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 PTCD3Q96EY7 689 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 Q96MF0 132 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TIMP4Q99727 224 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 TBCDQ9BTW9 1192 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 EFCAB11Q9BUY7 163 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 PITHD1Q9GZP4 211 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 RPF2Q9H7B2 306 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 NT5DC2Q9H857 520 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 PLEKHF2Q9H8W4 249 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 PRDM7Q9NQW5 492 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 GPRC5BQ9NZH0 403 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 CD274Q9NZQ7 290 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 EXPH5Q8NEV8 1989 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 NSD1Q96L73 2696 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 RTTNQ86VV8 2226 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 DNHD1Q96M86 4753 aa9.62□□□□□ -0.87
CDC42BPB-207ENST00000560492 KIAA1324LA8MWY0 1029 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 HRKO00198 91 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 PGRMC1O00264 195 aaKnown RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 DNALI1O14645 258 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 GNB5O14775 395 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 CYP4B1P13584 511 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 ALOX15P16050 662 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 KRT15P19012 456 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 HIST1H1TP22492 207 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 CPOXP36551 454 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 ELK3P41970 407 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 SLC6A12P48065 614 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 SORDQ00796 357 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 CHIT1Q13231 466 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 SLAMF1Q13291 335 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 LAPTM5Q13571 262 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 TGFBIQ15582 683 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 MSS51Q4VC12 460 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 TBCELQ5QJ74 424 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 C6orf163Q5TEZ5 329 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 BICRALQ6AI39 1079 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 GPSM1Q86YR5 675 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 MYLK4Q86YV6 388 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 IGDCC3Q8IVU1 814 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 PDIK1LQ8N165 341 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 TCAIMQ8N3R3 496 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 C7orf57Q8NEG2 295 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 ZNF592Q92610 1267 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 FBXL20Q96IG2 436 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 RILPQ96NA2 401 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 MDFIQ99750 246 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 CENPKQ9BS16 269 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 SORBS1Q9BX66 1292 aaKnown RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 WWTR1Q9GZV5 400 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 UBTD1Q9HAC8 227 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 NDRG3Q9UGV2 375 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 CNOT11Q9UKZ1 510 aaKnown RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 CHCHD2Q9Y6H1 151 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 VPS13CQ709C8 3753 aa9.61□□□□□ -0.87
CDC42BPB-207ENST00000560492 FBN3Q75N90 2809 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 C2orf92A0A1B0GVN3 265 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 ESPNB1AK53 854 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 H0Y3Z8 333 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 PRKRAO75569 313 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 STK16O75716 305 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 GOSR1O95249 250 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 C1QAP02745 245 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 HRGP04196 525 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 FBXO45P0C2W1 286 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 EPB42P16452 691 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 BUD31P41223 144 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 TMED10P49755 219 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 CDK9P50750 372 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 NRG3P56975 720 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 FBXW4P57775 412 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 TAS2R39P59534 338 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 RPP38P78345 283 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 SRYQ05066 204 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
CDC42BPB-207ENST00000560492 KBTBD12Q3ZCT8 623 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms