RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ANKUB1A6NFN9 424 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 C9J4A7 227 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 RTCAO00442 366 aaKnown RBP11.08□□□□□ -0.64
LDLR-212ENST00000560467 AIM2O14862 343 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 UNC5CO95185 931 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 LRATO95237 230 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 NPPAP01160 153 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 GBAP04062 536 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 PIM1P11309 404 aaPredicted RBP11.08□□□□□ -0.64
LDLR-212ENST00000560467 CPN2P22792 545 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 BSGP35613 385 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 FOXL2P58012 376 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 MAPKAPK3Q16644 382 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 DNAL1Q4LDG9 190 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
LDLR-212ENST00000560467 MSANTD1Q6ZTZ1 278 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 TICAM1Q8IUC6 712 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 TMEM151BQ8IW70 566 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 PROKR1Q8TCW9 393 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 MCUR1Q96AQ8 359 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 TESCQ96BS2 214 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 MVB12AQ96EY5 273 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 ITCHQ96J02 903 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 FCRL1Q96LA6 429 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 OR52E6Q96RD3 313 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 SH3GL1Q99961 368 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 KLHL31Q9H511 634 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 LYRM4Q9HD34 91 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 PRDM7Q9NQW5 492 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 ARL8BQ9NVJ2 186 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 B3GNT3Q9Y2A9 372 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 NTNG1Q9Y2I2 539 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 NAALAD2Q9Y3Q0 740 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 ZNF780BQ9Y6R6 833 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 SPTBP11277 2137 aa11.08□□□□□ -0.64
LDLR-212ENST00000560467 A0A0G2JN53 185 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 C1orf226A1L170 272 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 H0YIG0 161 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 CLDN4O14493 209 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 MRASO14807 208 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 ZNF749O43361 778 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 EEDO75530 441 aaKnown RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 KLF7O75840 302 aaPredicted RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 KLHL18O94889 574 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 ANP32DO95626 131 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 PGRP06401 933 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 IL3P08700 152 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 DDCP20711 480 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 TPP2P29144 1249 aaPredicted RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 PPP2R1BP30154 601 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 NUDT2P50583 147 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 C21orf58P58505 322 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 RAE1P78406 368 aaKnown RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 KLC1Q07866 573 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 HYAL2Q12891 473 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 RCAN2Q14206 197 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 PRTGQ2VWP7 1150 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 FAM174BQ3ZCQ3 159 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 VPS26BQ4G0F5 336 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 TIGD2Q4W5G0 525 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 C6orf10Q5SRN2 563 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 C1orf189Q5VU69 101 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 C1QL3Q5VWW1 255 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 PRMT9Q6P2P2 845 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 TRIML2Q8N7C3 387 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 POU5F2Q8N7G0 328 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 ZFP28Q8NHY6 868 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 GFM2Q969S9 779 aaKnown RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 ROPN1LQ96C74 230 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 KLHL29Q96CT2 875 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 RAB3IPQ96QF0 476 aaPredicted RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 DUSP26Q9BV47 211 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 YIPF2Q9BWQ6 316 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 CUTCQ9NTM9 273 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 FAM120CQ9NX05 1096 aaKnown RBP11.07□□□□□ -0.64
LDLR-212ENST00000560467 EHD3Q9NZN3 535 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 C5AR2Q9P296 337 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 FBXW2Q9UKT8 454 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 ENTPD4Q9Y227 616 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 PADI2Q9Y2J8 665 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
LDLR-212ENST00000560467 A0A0A6YYD5 115 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 PRSS51A0A1B0GVH4 220 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 FITM1A5D6W6 292 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 SCAMP2O15127 329 aaKnown RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 HCRTR1O43613 425 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 GALR3O60755 368 aaPredicted RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 CNOT3O75175 753 aaKnown RBP11.06□□□□□ -0.64
LDLR-212ENST00000560467 SCELO95171 688 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 KCNH1O95259 989 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 BMP10O95393 424 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 STAMBPO95630 424 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 NR2F6P10588 404 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 AGXTP21549 392 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 IL10P22301 178 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 TACR1P25103 407 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 NTSP30990 170 aa11.06□□□□□ -0.64
LDLR-212ENST00000560467 NFYCQ13952 458 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms