RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PFDN4Q9NQP4 134 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 PRTFDC1Q9NRG1 225 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 PRDM4Q9UKN5 801 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 FBXW2Q9UKT8 454 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 PPT2Q9UMR5 302 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 YARS2Q9Y2Z4 477 aaKnown RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 TEP1Q99973 2627 aaKnown RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ANKDD1BA6NHY2 528 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 A8MT66 165 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 A8MUA0 341 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 CLGNO14967 610 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 PEX1O43933 1283 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 SUPT3HO75486 399 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ZFAND5O76080 213 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 SNRPB2P08579 225 aaKnown RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 GFAPP14136 432 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 CAPN3P20807 821 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 HNRNPH1P31943 449 aaKnown RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 PTGER1P34995 402 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 NCALDP61601 193 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 BTN3A2P78410 334 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 TGM3Q08188 693 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 SLC13A2Q13183 592 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 TGFBIQ15582 683 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ELAVL1Q15717 326 aaKnown RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ARL13AQ5H913 290 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 TMEM211Q6ICI0 200 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ARHGAP11AQ6P4F7 1023 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 FGD2Q7Z6J4 655 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 CD163Q86VB7 1156 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 TMEM132CQ8N3T6 1108 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 CA5BP1Q8WTZ4 195 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 CHTF18Q8WVB6 975 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 DAZLQ92904 295 aaKnown RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 NCLNQ969V3 563 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 L3HYPDHQ96EM0 354 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 NSL1Q96IY1 281 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 SERINC2Q96SA4 455 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 LRMDAQ9H2I8 198 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 COPS7BQ9H9Q2 264 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 WWOXQ9NZC7 414 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 STK38LQ9Y2H1 464 aa12.62□□□□□ -0.39
SMAD3-214ENST00000560402 ANKRD17O75179 2603 aaKnown RBP12.62□□□□□ -0.39
SMAD3-214ENST00000560402 TACC2O95359 2948 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 LRIT2A6NDA9 550 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 A8MVJ9 347 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 C19orf84I3L1E1 186 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ACOT7O00154 380 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ADAM10O14672 748 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 TPOP07202 933 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 NQO1P15559 274 aaKnown RBP12.61□□□□□ -0.39
SMAD3-214ENST00000560402 IMPDH1P20839 514 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 GGT5P36269 586 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 GMPRP36959 345 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 MTTPP55157 894 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 HERVK_113P63132 956 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 RUNX2Q13950 521 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 CMPK2Q5EBM0 449 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 PAOXQ6QHF9 649 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ISCA2Q86U28 154 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF295-AS1Q8N0V1 137 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 SPATA6LQ8N4H0 392 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 TMEM151AQ8N4L1 468 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF781Q8N8C0 355 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 FAM47BQ8NA70 645 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 PSD4Q8NDX1 1056 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ASB5Q8WWX0 329 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 EXT2Q93063 718 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 SDCCAG3Q96C92 435 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 WDR34Q96EX3 536 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 QRFPRQ96P65 431 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 TREX2Q9BQ50 279 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-214ENST00000560402 CCDC28BQ9BUN5 200 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 EFCAB11Q9BUY7 163 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ROGDIQ9GZN7 287 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 REXO4Q9GZR2 422 aaKnown RBP12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ENKD1Q9H0I2 346 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 TP63Q9H3D4 680 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-214ENST00000560402 PNO1Q9NRX1 252 aaKnown RBP12.61□□□□□ -0.39
SMAD3-214ENST00000560402 DNAJC11Q9NVH1 559 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 PNPOQ9NVS9 261 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 HPF1Q9NWY4 346 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF223Q9UK11 482 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-214ENST00000560402 CLDN16Q9Y5I7 305 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 F8P00451 2351 aa12.61□□□□□ -0.39
SMAD3-214ENST00000560402 A0A1B0GTH9 108 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 STX16-NPEPL1H3BU86 382 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 STX16O14662 325 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 HS6ST1O60243 411 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 SBK3P0C264 359 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 KCNC1P48547 511 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms