RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZNF747Q9BV97 191 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 CCDC106Q9BWC9 280 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 GPR174Q9BXC1 333 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 ERVK-6Q9BXR3 956 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 TRIM54Q9BYV2 358 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 ANKRD60Q9BZ19 345 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 C20orf27Q9GZN8 174 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 ABCG4Q9H172 646 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 OR10A2Q9H208 303 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 STN1Q9H668 368 aaKnown RBP6.69□□□□□ -1.34
ZEB1-216ENST00000559496 COG4Q9H9E3 785 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 FANCFQ9NPI8 374 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 AKIP1Q9NQ31 210 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 OLAHQ9NV23 265 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 WSB2Q9NYS7 404 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-216ENST00000559496 MARCOQ9UEW3 520 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-216ENST00000559496 RIMS3Q9UJD0 308 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 ZNF221Q9UK13 617 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 PSME2Q9UL46 239 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 CDYLQ9Y232 598 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 CA5BQ9Y2D0 317 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 RNF11Q9Y3C5 154 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 PRKAB1Q9Y478 270 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 UGT2A1Q9Y4X1 527 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 CACNG2Q9Y698 323 aa6.69□□□□□ -1.34
ZEB1-216ENST00000559496 XIRP2A4UGR9 3374 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 POM121BA6NF01 834 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 LRRC14BA6NHZ5 514 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 C10orf142B7Z368 130 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 PRAMEF26H0Y7S4 382 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SLC16A5O15375 505 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 KLK8O60259 260 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 NDUFS2O75306 463 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SUPT7LO94864 414 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SIX3O95343 332 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 NADKO95544 446 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 GUCA1CO95843 209 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CATP04040 527 aaKnown RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 IGHV4-34P06331 123 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CHRNGP07510 517 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 HOXC4P09017 264 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 TRAPPC2P0DI81 140 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 TRAPPC2BP0DI82 140 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 KITP10721 976 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ITGA2P17301 1181 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CYP2A7P20853 494 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 KELP23276 732 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 APEX1P27695 318 aaKnown RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 HTR1BP28222 390 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 EEF1DP29692 281 aaKnown RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 TSPAN7P41732 249 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 MAPK9P45984 424 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CCR10P46092 362 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CXCL12P48061 93 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 PRIM2P49643 509 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 AGTR2P50052 363 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 MECP2P51608 486 aaKnown RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SIGLEC14Q08ET2 396 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ABRQ12979 859 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 PRKAA1Q13131 559 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 NFATC4Q14934 902 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 UNC50Q53HI1 259 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 FBXO48Q5FWF7 155 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ZNF678Q5SXM1 525 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.68□□□□□ -1.345e-6■■□□□ 13.9
ZEB1-216ENST00000559496 UBE2UQ5VVX9 321 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 RSBN1Q5VWQ0 802 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ANKS6Q68DC2 871 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SULT1C3Q6IMI6 304 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ZNF544Q6NX49 715 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 GCNT7Q6ZNI0 430 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 FRMD7Q6ZUT3 714 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ZNF767PQ75MW2 155 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SLC22A15Q8IZD6 547 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 Q8N1X5 172 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 PARP8Q8N3A8 854 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 FBXW8Q8N3Y1 598 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CAMKK1Q8N5S9 505 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 FRMD1Q8N878 549 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SLC16A11Q8NCK7 471 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 C7orf57Q8NEG2 295 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 OR5H6Q8NGV6 325 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 LRRC20Q8TCA0 184 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 MCOLN3Q8TDD5 553 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CFHR4Q92496 578 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SNX19Q92543 992 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 FIG4Q92562 907 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 PIK3R3Q92569 461 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 BIRC7Q96CA5 298 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CLPTM1LQ96KA5 538 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 FOPNLQ96NB1 174 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 CLUHP3Q96NS8 147 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 SERPINI1Q99574 410 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 TRMOQ9BU70 441 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 NPLQ9BXD5 320 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 NMUR2Q9GZQ4 415 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 ILKAPQ9H0C8 392 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-216ENST00000559496 GSTO2Q9H4Y5 243 aa6.68□□□□□ -1.34
ZEB1-216ENST00000559496 NARFLQ9H6Q4 476 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms