RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ATP6AP2O75787 350 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 IGKV3-11P04433 115 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 CPMP14384 443 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 PRPH2P23942 346 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 PIK3R1P27986 724 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 SLC1A6P48664 564 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 TNFSF10P50591 281 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 XKP51811 444 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 RPL38P63173 70 aaKnown RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 SRSF11Q05519 484 aaKnown RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 TUBA3CQ13748 450 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 ZNF267Q14586 743 aaPredicted RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 IGFBP7Q16270 282 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 MEP1AQ16819 746 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 GALNTL6Q49A17 601 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 RFTN2Q52LD8 501 aaPredicted RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 HDXQ7Z353 690 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 ZNF227Q86WZ6 799 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 C9orf40Q8IXQ3 194 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 SLC5A8Q8N695 610 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 SIMC1Q8NDZ2 872 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 OR4K14Q8NGD5 310 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 OR1N1Q8NGS0 311 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.39■□□□□ 0.375e-6■■■■■ 56.5
CASC4-209ENST00000559222 HAS2Q92819 552 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 DAZLQ92904 295 aaKnown RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 KLHL29Q96CT2 875 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 SENP5Q96HI0 755 aaPredicted RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 FCRL1Q96LA6 429 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 ZNF681Q96N22 645 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 CNPPD1Q9BV87 410 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 ARGLU1Q9NWB6 273 aaPredicted RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 C1orf109Q9NX04 203 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 CNTRLQ7Z7A1 2325 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 OR5H15A6NDH6 313 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 NPIPB8E9PQR5 432 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 RGS14O43566 566 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 SLC35E2P0CK97 266 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 SDC1P18827 310 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 SSTR4P31391 388 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 CD96P40200 585 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 ZNF763Q0D2J5 394 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 ZNF169Q14929 603 aaPredicted RBP17.38■□□□□ 0.37
CASC4-209ENST00000559222 SPRED3Q2MJR0 410 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 FAM71E1Q6IPT2 247 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 FAM111BQ6SJ93 734 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 ARMC10Q8N2F6 343 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 CLHC1Q8NHS4 586 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 EXOSC8Q96B26 276 aaKnown RBP17.38■□□□□ 0.37
CASC4-209ENST00000559222 ATP6V1G3Q96LB4 118 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 PPP1R36Q96LQ0 422 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 RNF32Q9H0A6 362 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 ZNF446Q9NWS9 450 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 UTS2RQ9UKP6 389 aa17.38■□□□□ 0.37
CASC4-209ENST00000559222 EML6Q6ZMW3 1958 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 DYTNA2CJ06 578 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 TTLL8A6PVC2 850 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 WWP2O00308 870 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 GUCY1B2O75343 617 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 CHEK2O96017 543 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 NEFHP12036 1026 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 COX7A2P14406 83 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 HK2P52789 917 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 C2orf80Q0P641 193 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 MGAT2Q10469 447 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 DUSP8Q13202 625 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 STX3Q13277 289 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 PDCD2Q16342 344 aaPredicted RBP17.37■□□□□ 0.37
CASC4-209ENST00000559222 CISD2Q8N5K1 135 aaKnown RBP17.37■□□□□ 0.37
CASC4-209ENST00000559222 MDS2Q8NDY4 140 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 ADCY4Q8NFM4 1077 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 RIT1Q92963 219 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 GFM2Q969S9 779 aaKnown RBP17.37■□□□□ 0.37
CASC4-209ENST00000559222 RBM18Q96H35 190 aaKnown RBP17.37■□□□□ 0.37
CASC4-209ENST00000559222 FBXL20Q96IG2 436 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 FAIM2Q9BWQ8 316 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.37■□□□□ 0.37
CASC4-209ENST00000559222 CXorf21Q9HAI6 301 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 MYNNQ9NPC7 610 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 SLAMF7Q9NQ25 335 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 PNPOQ9NVS9 261 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 BAIAP2L1Q9UHR4 511 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 TEKT2Q9UIF3 430 aa17.37■□□□□ 0.37
CASC4-209ENST00000559222 PEX11AO75192 247 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 ITGA10O75578 1167 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 ZFAND5O76080 213 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 PORP16435 677 aaPredicted RBP17.36■□□□□ 0.37
CASC4-209ENST00000559222 NT5EP21589 574 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 SLC18A1P54219 525 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 RNF4P78317 190 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 PMP22Q01453 160 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 INPP5JQ15735 1006 aaPredicted RBP17.36■□□□□ 0.37
CASC4-209ENST00000559222 SPINK14Q6IE38 97 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 ANKRD26P1Q6NSI1 321 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 HSDL2Q6YN16 418 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 NUDT8Q8WV74 236 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 SNRNP40Q96DI7 357 aaKnown RBP17.36■□□□□ 0.37
CASC4-209ENST00000559222 TSSK3Q96PN8 268 aa17.36■□□□□ 0.37
CASC4-209ENST00000559222 C1orf50Q9BV19 199 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms