RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MCRIP2Q9BUT9 160 aaKnown RBP3.73□□□□□ -1.81
CASC4-206ENST00000558847 FGFBP2Q9BYJ0 223 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 STRADBQ9C0K7 418 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 CNOT2Q9NZN8 540 aaKnown RBP3.73□□□□□ -1.81
CASC4-206ENST00000558847 CLIP2Q9UDT6 1046 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 CACNG5Q9UF02 275 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 TUBGCP4Q9UGJ1 667 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 NUDCQ9Y266 331 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 ATG4BQ9Y4P1 393 aa3.73□□□□□ -1.81
CASC4-206ENST00000558847 FAM205AQ6ZU69 1335 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 CLDN3O15551 220 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 ZFAND5O76080 213 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 FHP07954 510 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 AKT2P31751 481 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 SRPXP78539 464 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 GABPB1Q06547 395 aaPredicted RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 KARSQ15046 597 aaKnown RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 AGKQ53H12 422 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 LIPJQ5W064 366 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 FBXL22Q6P050 247 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 GOLGA7Q7Z5G4 137 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 ITIH5Q86UX2 942 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 PCNPQ8WW12 178 aaKnown RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 FCGR1BQ92637 280 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 C11orf52Q96A22 123 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 MRPL38Q96DV4 380 aaKnown RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 CNRIP1Q96F85 164 aaPredicted RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 COG3Q96JB2 828 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 FICDQ9BVA6 458 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 UPF3AQ9H1J1 476 aaKnown RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 DPH5Q9H2P9 285 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 RPAP3Q9H6T3 665 aaPredicted RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 DCTPP1Q9H773 170 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 SOHLH2Q9NX45 425 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 THYN1Q9P016 225 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 TMEM181Q9P2C4 612 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 ANKMY1Q9P2S6 941 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 LHX3Q9UBR4 397 aa3.72□□□□□ -1.81
CASC4-206ENST00000558847 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.72□□□□□ -1.81
CASC4-206ENST00000558847 AFF2P51816 1311 aa3.71□□□□□ -1.81
CASC4-206ENST00000558847 IGHV4-30-2A0A087WSY4 118 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 A0A087X002 238 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 LOC390937A0A1W2PQ73 354 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 TMEM89A2RUT3 159 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 RGSL1A5PLK6 1076 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 NEDD8-MDP1E9PL57 170 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 FBP2O00757 339 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 HEXBP07686 556 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 CFC1BP0CG36 223 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 CFC1P0CG37 223 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 RPA1P27694 616 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 HSPA1LP34931 641 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 NPY2RP49146 381 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ZNF131P52739 623 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 MTTPP55157 894 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 NLRP11P59045 1033 aaKnown RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 RPL27P61353 136 aaKnown RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 HERVK_113P63132 956 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ERVK-8P63133 956 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 PRKCEQ02156 737 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 PDZK1IP1Q13113 114 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 KLF5Q13887 457 aaPredicted RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 TMEM187Q14656 261 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 TAF7Q15545 349 aaPredicted RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 FAM182AQ5T1J6 154 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 RHBDD2Q6NTF9 364 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ADAM5Q6NVV9 412 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 AFTPHQ6ULP2 937 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 WDR49Q8IV35 697 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 LINC00518Q8N0U6 118 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 CERS5Q8N5B7 392 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 CHPT1Q8WUD6 406 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 P3H4Q92791 437 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 WBP1Q96G27 269 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 C16orf58Q96GQ5 468 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ATXN7L3BQ96GX2 97 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 TSPAN18Q96SJ8 248 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 GPA33Q99795 319 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 NDUFAF3Q9BU61 184 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ERVK-6Q9BXR3 956 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 PARLQ9H300 379 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 MOB1AQ9H8S9 216 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ECT2Q9H8V3 914 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ROPN1Q9HAT0 212 aaPredicted RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 VAT1LQ9HCJ6 419 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 POLD4Q9HCU8 107 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 FAM212BQ9NTI7 297 aaPredicted RBP3.71□□□□□ -1.82
CASC4-206ENST00000558847 IL20RAQ9UHF4 553 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 MGAT4BQ9UQ53 548 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 WDR81Q562E7 1941 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 NPC1L1Q9UHC9 1359 aa3.71□□□□□ -1.82
CASC4-206ENST00000558847 ATP8B3O60423 1300 aa3.7□□□□□ -1.82
CASC4-206ENST00000558847 NCAPD2Q15021 1401 aa3.7□□□□□ -1.82
CASC4-206ENST00000558847 NPIPA5A0A0B4J1W7 369 aa3.7□□□□□ -1.82
CASC4-206ENST00000558847 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
CASC4-206ENST00000558847 FAM230AA0A1W2PPH8 454 aa3.7□□□□□ -1.82
CASC4-206ENST00000558847 RNF212BA8MTL3 300 aa3.7□□□□□ -1.82
CASC4-206ENST00000558847 NPIPA5E9PKD4 350 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms