RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KIRREL3Q8IZU9 778 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 CLYBLQ8N0X4 340 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 KIF2BQ8N4N8 673 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SLC15A4Q8N697 577 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 C1orf52Q8N6N3 182 aaKnown RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 ST6GALNAC3Q8NDV1 305 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 NUBPLQ8TB37 319 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SLC2A12Q8TD20 617 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 GRHL3Q8TE85 626 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 ZNF721Q8TF20 911 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 PGM2Q96G03 612 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 FBXL20Q96IG2 436 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SGCZQ96LD1 299 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 FAM111AQ96PZ2 611 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 NPAS2Q99743 824 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 CCT7Q99832 543 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 GATA5Q9BWX5 397 aaPredicted RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 CFL2Q9Y281 166 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 PCDHA9Q9Y5H5 950 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 CSAG2Q9Y5P2 127 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 ZNF780BQ9Y6R6 833 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 TNRC6AQ8NDV7 1962 aaKnown RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 NUP210LQ5VU65 1888 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 RELNP78509 3460 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ANKUB1A6NFN9 424 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 GLOD5A6NK44 160 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 A8MVJ9 347 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 TCP11X1B4DZS4 312 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 NPIPB8E9PQR5 432 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 KLRC4-KLRK1H3BQV0 150 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 AZIN1O14977 448 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 TM9SF1O15321 606 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 BIRC5O15392 142 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 RGS14O43566 566 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 TYROBPO43914 113 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 SPAG7O75391 227 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 RSL1D1O76021 490 aaKnown RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 DDAH2O95865 285 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 F10P00742 488 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 IGKV3-11P04433 115 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ANXA4P09525 319 aaPredicted RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 EDN3P14138 238 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 CPMP14384 443 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ALDH3A1P30838 453 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 MPIP34949 423 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ID2Q02363 134 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 MAP4K2Q12851 820 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ZNF267Q14586 743 aaPredicted RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 PCLAFQ15004 111 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 MAPKAPK3Q16644 382 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.88□□□□□ -1.159e-6■■■■□ 24.9
TPM1-213ENST00000558400 KRTCAP3Q53RY4 240 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 FHL5Q5TD97 284 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 SPINK14Q6IE38 97 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 SLC48A1Q6P1K1 146 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 RNF111Q6ZNA4 994 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 SLC29A4Q7RTT9 530 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 NUDCD3Q8IVD9 361 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 DND1Q8IYX4 353 aaKnown RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 POGLUT1Q8NBL1 392 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 MDS2Q8NDY4 140 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 OR7G1Q8NGA0 311 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 THAP3Q8WTV1 239 aaPredicted RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 ASB15Q8WXK1 588 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 PPWD1Q96BP3 646 aaKnown RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 C19orf60Q96EN9 201 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 C11orf24Q96F05 449 aaPredicted RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 SCMH1Q96GD3 660 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 PSMG3-AS1Q96PY0 264 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ACPTQ9BZG2 426 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 C12orf65Q9H3J6 166 aaKnown RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 CENPHQ9H3R5 247 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 CXorf21Q9HAI6 301 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 GIMAP4Q9NUV9 329 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 OLAHQ9NV23 265 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 HPF1Q9NWY4 346 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 TEX10Q9NXF1 929 aaPredicted RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 EHD3Q9NZN3 535 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 CES1P1Q9UKY3 287 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 ERVK-11Q9UQG0 969 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 KLF13Q9Y2Y9 288 aaPredicted RBP7.88□□□□□ -1.15
TPM1-213ENST00000558400 TRAF6Q9Y4K3 522 aa7.88□□□□□ -1.15
TPM1-213ENST00000558400 MYOCOSA0A1B0GUC4 107 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 WASHC1A8K0Z3 465 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 CAPN14A8MX76 684 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 PCDH7O60245 1069 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 MAN1A2O60476 641 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 SEC22BO75396 215 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 ERAL1O75616 437 aaKnown RBP7.87□□□□□ -1.15
TPM1-213ENST00000558400 SLC25A12O75746 678 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 BCAS2O75934 225 aaPredicted RBP7.87□□□□□ -1.15
TPM1-213ENST00000558400 OR2J2O76002 312 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 NEURL1O76050 574 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 ZWINTO95229 277 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 ATP1B1P05026 303 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 BPGMP07738 259 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 NEFHP12036 1026 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 CHN1P15882 459 aa7.87□□□□□ -1.15
TPM1-213ENST00000558400 DDX5P17844 614 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms