RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SERPINB4P48594 390 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 CYB561P49447 251 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 HEPACAMQ14CZ8 416 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 NR6A1Q15406 480 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 OR1C1Q15619 314 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 IGFBP7Q16270 282 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 ARL13AQ5H913 290 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-211ENST00000557623 FAM219BQ5XKK7 198 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 KANK2Q63ZY3 851 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 CLEC6AQ6EIG7 209 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 SLC48A1Q6P1K1 146 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 GALNT18Q6P9A2 607 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 FAM180AQ6UWF9 173 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 CLYBLQ8N0X4 340 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 GALNT11Q8NCW6 608 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 PPP1R14CQ8TAE6 165 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 FAM76AQ8TAV0 307 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF721Q8TF20 911 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 PPWD1Q96BP3 646 aaKnown RBP11.62□□□□□ -0.55
SLIRP-211ENST00000557623 SENP5Q96HI0 755 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-211ENST00000557623 FBXL20Q96IG2 436 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 C5orf34Q96MH7 638 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 TNFRSF12AQ9NP84 129 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 KCNK9Q9NPC2 374 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 LRFN1Q9P244 771 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 WBP11Q9Y2W2 641 aaKnown RBP11.62□□□□□ -0.55
SLIRP-211ENST00000557623 YARS2Q9Y2Z4 477 aaKnown RBP11.62□□□□□ -0.55
SLIRP-211ENST00000557623 FIS1Q9Y3D6 152 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF780BQ9Y6R6 833 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 WASHC1A8K0Z3 465 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 NPIPB8E9PQR5 432 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ITGA10O75578 1167 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 SNUPNO95149 360 aaKnown RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 CHRNGP07510 517 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ANXA4P09525 319 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 CPMP14384 443 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 PORP16435 677 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 CSNK2A2P19784 350 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ALDH9A1P49189 494 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 HLCSP50747 726 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 XKP51811 444 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 RNF4P78317 190 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 RAE1P78406 368 aaKnown RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF763Q0D2J5 394 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 CASP8Q14790 479 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF766Q5HY98 468 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ZCCHC23Q6ZST2 131 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 GPALPP1Q8IXQ4 340 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 SAMD14Q8IZD0 417 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 TMEM156Q8N614 296 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 TMEM178AQ8NBL3 297 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 MDS2Q8NDY4 140 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 NUBPLQ8TB37 319 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 C16orf78Q8WTQ4 265 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 THAP3Q8WTV1 239 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 UCN3Q969E3 161 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 KLHL29Q96CT2 875 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 C11orf24Q96F05 449 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 CNPPD1Q9BV87 410 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 TRIM45Q9H8W5 580 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ASF1BQ9NVP2 202 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-211ENST00000557623 ANKRD10Q9NXR5 420 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 MYOTQ9UBF9 498 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 CES1P1Q9UKY3 287 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 DLGAP4Q9Y2H0 992 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 TRAF6Q9Y4K3 522 aa11.61□□□□□ -0.55
SLIRP-211ENST00000557623 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 PYCARD-AS1I3L0S3 204 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SEC22BO75396 215 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ERAL1O75616 437 aaKnown RBP11.6□□□□□ -0.55
SLIRP-211ENST00000557623 RASAL1O95294 804 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 CRYABP02511 175 aaKnown RBP11.6□□□□□ -0.55
SLIRP-211ENST00000557623 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 IL3P08700 152 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 DHRS4L1P0CG22 281 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 NT5EP21589 574 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SSR4P51571 173 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 HK2P52789 917 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ERVK-8P63133 956 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF267Q14586 743 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SH2D4BQ5SQS7 431 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SPINK14Q6IE38 97 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 RNF111Q6ZNA4 994 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 DGAT2L6Q6ZPD8 337 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SLC29A4Q7RTT9 530 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 GALNT12Q8IXK2 581 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 BCORP1Q8N888 145 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF321PQ8N8H1 164 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 FAM98AQ8NCA5 519 aaKnown RBP11.6□□□□□ -0.55
SLIRP-211ENST00000557623 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 DNAJB8Q8NHS0 232 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 TWIST2Q8WVJ9 160 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 ASB15Q8WXK1 588 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 TMEM125Q96AQ2 219 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SCMH1Q96GD3 660 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 SIGLEC12Q96PQ1 595 aa11.6□□□□□ -0.55
SLIRP-211ENST00000557623 BARD1Q99728 777 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms