RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FUNDC2Q9BWH2 189 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TTLL2Q9BWV7 592 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 NAA50Q9GZZ1 169 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CWH43Q9H720 699 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ELAC1Q9H777 363 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SMURF2Q9HAU4 748 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RDH14Q9HBH5 336 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SLC52A3Q9NQ40 469 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TRMT13Q9NUP7 481 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DCAF13Q9NV06 445 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DNAJC11Q9NVH1 559 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 FAM120CQ9NX05 1096 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 IMPAD1Q9NX62 359 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 IL37Q9NZH6 218 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 VAPAQ9P0L0 249 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 KLHL42Q9P2K6 505 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 LHX3Q9UBR4 397 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 AFF4Q9UHB7 1163 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 IKZF3Q9UKT9 509 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 USP22Q9UPT9 525 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MAN2B2Q9Y2E5 1009 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF510Q9Y2H8 683 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SAMHD1Q9Y3Z3 626 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 AP1M2Q9Y6Q5 423 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DENND4AQ7Z401 1863 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DOCK4Q8N1I0 1966 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PLXNA4Q9HCM2 1894 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PNMA8CA0A1B0GUJ8 204 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ISPDA4D126 451 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TMEM247A6NEH6 219 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 IQCF5A8MTL0 148 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MAGEB17A8MXT2 336 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 EFCAB9A8MZ26 197 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 F8W810 466 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 H3BNC9 293 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PRRG1O14668 218 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 FPGTO14772 594 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ADAMDEC1O15204 470 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SLC16A5O15375 505 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SLC16A6O15403 523 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 COCHO43405 550 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PRAMEF4O60810 478 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SULT1C4O75897 302 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 FTH1P02794 183 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SRPRAP08240 638 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TFPTP0C1Z6 253 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ZDHHC11BP0C7U3 371 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MPC1LP0DKB6 136 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MYCLP1P12525 358 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 BCKDHAP12694 445 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CYP4B1P13584 511 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ITGA2P17301 1181 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PRPS1L1P21108 318 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 HTR1BP28222 390 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SLC6A4P31645 630 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 HMGCLP35914 325 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 OPRL1P41146 370 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CSKP41240 450 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ASMTP46597 345 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 RGRP47804 291 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ZFP36L2P47974 494 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TRPC1P48995 793 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SLC11A1P49279 550 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CDKN1CP49918 316 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 BMXP51813 675 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 AP1S2P56377 157 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CLDN8P56748 225 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CXCR4P61073 352 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SNRPD1P62314 119 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TUBA1BP68363 451 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 OLR1P78380 273 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ARF5P84085 180 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 HMGCS1Q01581 520 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ELP6Q0PNE2 266 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 HYAL1Q12794 435 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 NFATC2Q13469 925 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 GPM6BQ13491 265 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 DGCR6Q14129 220 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 BOP1Q14137 746 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 MAPK11Q15759 364 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 DUOXA1Q1HG43 343 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PLEKHG6Q3KR16 790 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TIMM50Q3ZCQ8 353 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 GGTA1PQ4G0N0 100 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 RFTN2Q52LD8 501 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 PYCR3Q53H96 274 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CLLU1OSQ5K130 101 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 LDLRAP1Q5SW96 308 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 SPOUT1Q5T280 376 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 LRIF1Q5T3J3 769 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ATXN7L2Q5T6C5 722 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 ANXA8L1Q5VT79 327 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 KIAA1614Q5VZ46 1190 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CAPN13Q6MZZ7 669 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 CES5AQ6NT32 575 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 DUS1LQ6P1R4 473 aaKnown RBP4.2□□□□□ -1.74
ATXN3-241ENST00000556374 NEK5Q6P3R8 708 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 DOK6Q6PKX4 331 aa4.2□□□□□ -1.74
ATXN3-241ENST00000556374 TBPL2Q6SJ96 375 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms