RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SPTBN1Q01082 2364 aaKnown RBP10.72□□□□□ -0.69
SLIRP-205ENST00000556310 C1orf226A1L170 272 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 TMEM200CA6NKL6 621 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 PGRMC2O15173 223 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 NME2P1O60361 137 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 CRCPO75575 148 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 CRYABP02511 175 aaKnown RBP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 SLC35E2P0CK97 266 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 CHN1P15882 459 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 NME2P22392 152 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 PIK3R1P27986 724 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 SSR4P51571 173 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 TDGF1P3P51864 188 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 HK2P52789 917 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 FOXA1P55317 472 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 TRA2BP62995 288 aaKnown RBP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 RNF4P78317 190 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 ZNF844Q08AG5 666 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 ACSM2AQ08AH3 577 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 ASPHQ12797 758 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 KRT71Q3SY84 523 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 DOPEY1Q5JWR5 2465 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 ACSM2BQ68CK6 577 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 SPINK14Q6IE38 97 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 DGAT2L6Q6ZPD8 337 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 C10orf107Q8IVU9 208 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 GPALPP1Q8IXQ4 340 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 CYP4Z2PQ8N1L4 340 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 TMEM156Q8N614 296 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 OR5L2Q8NGL0 311 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 NUBPLQ8TB37 319 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 CHTF18Q8WVB6 975 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 TMEM125Q96AQ2 219 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 PPWD1Q96BP3 646 aaKnown RBP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 SENP5Q96HI0 755 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 SMC6Q96SB8 1091 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 TRMOQ9BU70 441 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 FAIM2Q9BWQ8 316 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 GATA5Q9BWX5 397 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 HES7Q9BYE0 225 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 KLHL1Q9NR64 748 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.71□□□□□ -0.69
SLIRP-205ENST00000556310 MYOTQ9UBF9 498 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 MCM8Q9UJA3 840 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 PCDHA9Q9Y5H5 950 aa10.71□□□□□ -0.69
SLIRP-205ENST00000556310 CROCCQ5TZA2 2017 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 ASPDHA6ND91 283 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 WASHC1A8K0Z3 465 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 PCDH7O60245 1069 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 TRIM13O60858 407 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SPAG7O75391 227 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 OR2J2O76002 312 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SP1P08047 785 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 UROSP10746 265 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 TIA1P31483 386 aaKnown RBP eCLIP10.7□□□□□ -0.7
SLIRP-205ENST00000556310 ERVK-8P63133 956 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 PMP22Q01453 160 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 HMGCS1Q01581 520 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SRSF1Q07955 248 aaKnown RBP eCLIP10.7□□□□□ -0.7
SLIRP-205ENST00000556310 UBAP2LQ14157 1087 aaKnown RBP10.7□□□□□ -0.7
SLIRP-205ENST00000556310 FHL5Q5TD97 284 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SLC25A25Q6KCM7 469 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SLC48A1Q6P1K1 146 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 GALNT18Q6P9A2 607 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 GALNTL5Q7Z4T8 443 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF227Q86WZ6 799 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 GALNT12Q8IXK2 581 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 C9orf40Q8IXQ3 194 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 FAM98AQ8NCA5 519 aaKnown RBP10.7□□□□□ -0.7
SLIRP-205ENST00000556310 OR4K14Q8NGD5 310 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 TCP10LQ8TDR4 215 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 RIT1Q92963 219 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 UCN3Q969E3 161 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 TM4SF18Q96CE8 201 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 C11orf24Q96F05 449 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-205ENST00000556310 FRMD6Q96NE9 622 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 RASL10BQ96S79 203 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 CNPPD1Q9BV87 410 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 TNFRSF12AQ9NP84 129 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SIRT5Q9NXA8 310 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 SLC17A7Q9P2U7 560 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 CES1P1Q9UKY3 287 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 ERVK-19Q9WJR5 959 aa10.7□□□□□ -0.7
SLIRP-205ENST00000556310 EXPH5Q8NEV8 1989 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 A0A1W2PS29 197 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 GOLGA6L10A6NI86 522 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 OR6C76A6NM76 312 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 A8MVJ9 347 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 HRKO00198 91 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 WWP2O00308 870 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 RGS16O15492 202 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 TYROBPO43914 113 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 RSL1D1O76021 490 aaKnown RBP10.69□□□□□ -0.7
SLIRP-205ENST00000556310 CPMP14384 443 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 ALDH3A1P30838 453 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 SOX3P41225 446 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 GSTM5P46439 218 aa10.69□□□□□ -0.7
SLIRP-205ENST00000556310 RAE1P78406 368 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms