RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 ZNF559Q9BR84 538 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 SLC6A15Q9H2J7 730 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 LIME1Q9H400 295 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 LDAHQ9H6V9 325 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 EXO5Q9H790 373 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 ACTR8Q9H981 624 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 ACOT9Q9Y305 439 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 RNF11Q9Y3C5 154 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 CHCHD2Q9Y6H1 151 aaPredicted RBP12.23□□□□□ -0.45
TGFB3-204ENST00000556285 AKAP6Q13023 2319 aa12.23□□□□□ -0.45
TGFB3-204ENST00000556285 FIGNL2A6NMB9 653 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 PGRMC2O15173 223 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 SUSD5O60279 629 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 SIX3O95343 332 aaPredicted RBP12.22□□□□□ -0.45
TGFB3-204ENST00000556285 GPR75O95800 540 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 GBAP04062 536 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 FBXO45P0C2W1 286 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 STX2P32856 288 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
TGFB3-204ENST00000556285 TRPC1P48995 793 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 WNT3P56703 355 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 SLC37A1P57057 533 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 KCNJ2P63252 427 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 PLIN5Q00G26 463 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 CPSF6Q16630 551 aaKnown RBP eCLIP12.22□□□□□ -0.45
TGFB3-204ENST00000556285 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 SEM1Q6ZVN7 128 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 GOLGA7Q7Z5G4 137 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 TMEM200AQ86VY9 491 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 POM121Q96HA1 1249 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 JSRP1Q96MG2 331 aaPredicted RBP12.22□□□□□ -0.45
TGFB3-204ENST00000556285 GPR78Q96P69 363 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 WWTR1Q9GZV5 400 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 ZNF703Q9H7S9 590 aaPredicted RBP12.22□□□□□ -0.45
TGFB3-204ENST00000556285 MS4A12Q9NXJ0 267 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 PHF11Q9UIL8 331 aa12.22□□□□□ -0.45
TGFB3-204ENST00000556285 CNOT11Q9UKZ1 510 aaKnown RBP12.22□□□□□ -0.45
TGFB3-204ENST00000556285 ESYT3A0FGR9 886 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 FOXO6A8MYZ6 492 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 H0YIV9 168 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 OR10H2O60403 315 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 AIFM1O95831 613 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 CT62P0C5K7 136 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 FAM58BPP0C7Q3 252 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 NR2F6P10588 404 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 GFAPP14136 432 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 PTX3P26022 381 aaPredicted RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 SSTR4P31391 388 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 ART1P52961 327 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 MYBPHQ13203 477 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 GTF2H2Q13888 395 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 EBPQ15125 230 aaKnown RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 SPRED3Q2MJR0 410 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 WLSQ5T9L3 541 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 LIPJQ5W064 366 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 BICRALQ6AI39 1079 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 GTF2H2CQ6P1K8 395 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 RNF111Q6ZNA4 994 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 ST13P4Q8IZP2 240 aaPredicted RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 PLD6Q8N2A8 252 aaKnown RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 LRRC25Q8N386 305 aaPredicted RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 FBXW8Q8N3Y1 598 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 SLC15A4Q8N697 577 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 RHEBL1Q8TAI7 183 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 WDR20Q8TBZ3 569 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 RIT1Q92963 219 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 SARAFQ96BY9 339 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 DDX31Q9H8H2 851 aaKnown RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 IPPKQ9H8X2 491 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 ZFP64Q9NPA5 681 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 SNX15Q9NRS6 342 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 ZNF358Q9NW07 568 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 CPSF2Q9P2I0 782 aaKnown RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 KCNN3Q9UGI6 736 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 ADGRE2Q9UHX3 823 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 UTP11Q9Y3A2 253 aaKnown RBP12.21□□□□□ -0.45
TGFB3-204ENST00000556285 TSC22D4Q9Y3Q8 395 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 L3MBTL1Q9Y468 752 aa12.21□□□□□ -0.45
TGFB3-204ENST00000556285 DNHD1Q96M86 4753 aa12.21□□□□□ -0.46
TGFB3-204ENST00000556285 A0A087X1B8 175 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 A0A096LPK6 155 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 IQANK1A0A1B0GTG1 560 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 OR7A17O14581 309 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 GPR37O15354 613 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 HCN1O60741 890 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 WDR1O75083 606 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 ALDOAP04075 364 aaKnown RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 TLX1P31314 330 aaPredicted RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 DNAJA1P31689 397 aaKnown RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 IST1P53990 364 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 ALDH18A1P54886 795 aaKnown RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 SLC7A5Q01650 507 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 CAV1Q03135 178 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 NAB1Q13506 487 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 UAP1Q16222 522 aaPredicted RBP12.2□□□□□ -0.46
TGFB3-204ENST00000556285 SLC29A4Q7RTT9 530 aa12.2□□□□□ -0.46
TGFB3-204ENST00000556285 WDR53Q7Z5U6 358 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms