RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ANXA11P50995 505 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ITGA1P56199 1179 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ADARB1P78563 741 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 MYBPC1Q00872 1141 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 DUSP2Q05923 314 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 EPS8Q12929 822 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TP53BP2Q13625 1128 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 C14orf28Q4W4Y0 310 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 IFI44LQ53G44 452 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 LYSMD4Q5XG99 296 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TMEM179BQ7Z7N9 219 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ARMC8Q8IUR7 673 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 APLFQ8IW19 511 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ST13P4Q8IZP2 240 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 OR56A1Q8NGH5 318 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 MIPOL1Q8TD10 442 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 SLC38A5Q8WUX1 472 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CCDC3Q9BQI4 270 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 NPLQ9BXD5 320 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 RAB33BQ9H082 229 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 GABARAPL1Q9H0R8 117 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 FAM60AQ9NP50 221 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 PCDHGB5Q9Y5G0 923 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 MAGED1Q9Y5V3 778 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CSNK1G3Q9Y6M4 447 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 KNL1Q8NG31 2342 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 C5orf58C9J3I9 102 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 hCG_2039718K7EN88 272 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 PLOD2O00469 737 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 EMC8O43402 210 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 SRPX2O60687 465 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 GALR3O60755 368 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 SNAP29O95721 258 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 ALBP02768 609 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 FHP07954 510 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 MATN1P21941 496 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 DNAJA1P31689 397 aaKnown RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 ARHGDIAP52565 204 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 EPHA4P54764 986 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 VSX2P58304 361 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 RPS26P62854 115 aaKnown RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 DEFB133Q30KQ1 61 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF750Q32MQ0 723 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 KRT80Q6KB66 452 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 C11orf74Q86VG3 221 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 MCATQ8IVS2 390 aaKnown RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 DNAJC22Q8N4W6 341 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 OR4K14Q8NGD5 310 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 TCTN2Q96GX1 697 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 OR51I1Q9H343 314 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 SERHL2Q9H4I8 314 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 C3orf14Q9HBI5 128 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 VNN3Q9NY84 501 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 EPHA6Q9UF33 1036 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 MRPS2Q9Y399 296 aaKnown RBP13.86□□□□□ -0.19
VPS33B-205ENST00000556096 SPACA6W5XKT8 324 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 LAMA1P25391 3075 aa13.86□□□□□ -0.19
VPS33B-205ENST00000556096 DNAH14Q0VDD8 3507 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 DPPA5A6NC42 116 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 TMEM247A6NEH6 219 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 SLC9B1P1A6NJY1 282 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 PDE9AO76083 593 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 PGM3O95394 542 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 C8orf89P0DMQ9 161 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 FPR1P21462 350 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 CNR2P34972 360 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 KHKP50053 298 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 PRR5P85299 388 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 MAPK11Q15759 364 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 USP53Q70EK8 1073 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 USP51Q70EK9 711 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 ARHGEF39Q8N4T4 335 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 CYGBQ8WWM9 190 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 ELP4Q96EB1 424 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 TMEM19Q96HH6 336 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF347Q96SE7 839 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 CHRNA10Q9GZZ6 450 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 SMOC1Q9H4F8 434 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 IL21RQ9HBE5 538 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 THSD1Q9NS62 852 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 NTMQ9P121 344 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 P2RX2Q9UBL9 471 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 RAB23Q9ULC3 237 aa13.85□□□□□ -0.19
VPS33B-205ENST00000556096 DNAJB6O75190 326 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 OPN1SWP03999 348 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 BCHEP06276 602 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 ITGA2P17301 1181 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 XKP51811 444 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 GPR19Q15760 415 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 PRTGQ2VWP7 1150 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 RFX4Q33E94 735 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 TSEN54Q7Z6J9 526 aaKnown RBP13.84□□□□□ -0.19
VPS33B-205ENST00000556096 HS3ST5Q8IZT8 346 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 LRRC25Q8N386 305 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-205ENST00000556096 ARL10Q8N8L6 244 aa13.84□□□□□ -0.19
VPS33B-205ENST00000556096 SPPL2AQ8TCT8 520 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms