RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PCLAFQ15004 111 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 GFRALQ6UXV0 394 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 SIAH3Q8IW03 269 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 SRRM1Q8IYB3 904 aaKnown RBP19■□□□□ 0.63
VTI1B-205ENST00000555543 GBP7Q8N8V2 638 aaPredicted RBP19■□□□□ 0.63
VTI1B-205ENST00000555543 ASB15Q8WXK1 588 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 RIT1Q92963 219 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 ART5Q96L15 291 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 SHCBP1LQ9BZQ2 653 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 SEC14L3Q9UDX4 400 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 SLC5A6Q9Y289 635 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 PLLPQ9Y342 182 aa19■□□□□ 0.63
VTI1B-205ENST00000555543 A8MVJ9 347 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 DYRK3O43781 588 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 LDLRP01130 860 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 CT62P0C5K7 136 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 GALNSP34059 522 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 MEOX1P50221 254 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 SLC37A1P57057 533 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 ALDH6A1Q02252 535 aaKnown RBP18.99■□□□□ 0.63
VTI1B-205ENST00000555543 ASPHQ12797 758 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 CFAP157Q5JU67 520 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 LIPMQ5VYY2 423 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 SLC48A1Q6P1K1 146 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 IL20RBQ6UXL0 311 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 C10orf107Q8IVU9 208 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 SULF2Q8IWU5 870 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 MREGQ8N565 214 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 FAM98AQ8NCA5 519 aaKnown RBP18.99■□□□□ 0.63
VTI1B-205ENST00000555543 OR4K14Q8NGD5 310 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 OR5L2Q8NGL0 311 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 NUBPLQ8TB37 319 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 APIPQ96GX9 242 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 ROPN1BQ9BZX4 212 aaPredicted RBP18.99■□□□□ 0.63
VTI1B-205ENST00000555543 CXorf21Q9HAI6 301 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 ROPN1Q9HAT0 212 aaPredicted RBP18.99■□□□□ 0.63
VTI1B-205ENST00000555543 DEPPQ9NTK1 212 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 HPF1Q9NWY4 346 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 MCM8Q9UJA3 840 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 ERVK-11Q9UQG0 969 aa18.99■□□□□ 0.63
VTI1B-205ENST00000555543 KLF13Q9Y2Y9 288 aaPredicted RBP18.99■□□□□ 0.63
VTI1B-205ENST00000555543 ICE1Q9Y2F5 2266 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 C1orf226A1L170 272 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 PCDH7O60245 1069 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 SPAG7O75391 227 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 STSP08842 583 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 CPMP14384 443 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 SSTR4P31391 388 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 RFC3P40938 356 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 XKP51811 444 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 GPR85P60893 370 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 C4orf17Q53FE4 359 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 GPALPP1Q8IXQ4 340 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 PSD4Q8NDX1 1056 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 C11orf24Q96F05 449 aaPredicted RBP18.98■□□□□ 0.63
VTI1B-205ENST00000555543 SLC17A7Q9P2U7 560 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 HEY2Q9UBP5 337 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 RAB21Q9UL25 225 aa18.98■□□□□ 0.63
VTI1B-205ENST00000555543 A0A0G2JMM0 328 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 A0A1W2PPB8 328 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 A0A1W2PRS3 328 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 SERTM1A2A2V5 107 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 WIPF3A6NGB9 483 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 KIR3DP1A8MWS1 328 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 NPIPA5E9PKD4 350 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 LRRTM2O43300 516 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 PEX1O43933 1283 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 GUCY1B2O75343 617 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 NADKO95544 446 aaPredicted RBP18.97■□□□□ 0.63
VTI1B-205ENST00000555543 CREB1P16220 341 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 ZNF24P17028 368 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 SERPINB3P29508 390 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 PTGER1P34995 402 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 NAA20P61599 178 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 DUSP2Q05923 314 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 ACSM2AQ08AH3 577 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 EBPQ15125 230 aaKnown RBP18.97■□□□□ 0.63
VTI1B-205ENST00000555543 MPEG1Q2M385 716 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 PIGGQ5H8A4 983 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 C1QL3Q5VWW1 255 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 ACSM2BQ68CK6 577 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 FAM180BQ6P0A1 224 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 RNF111Q6ZNA4 994 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 GALNT12Q8IXK2 581 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 GPR137Q96N19 417 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 FAM111AQ96PZ2 611 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 GAL3ST4Q96RP7 486 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 GATA5Q9BWX5 397 aaPredicted RBP18.97■□□□□ 0.63
VTI1B-205ENST00000555543 WWTR1Q9GZV5 400 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 IQCGQ9H095 443 aaKnown RBP18.97■□□□□ 0.63
VTI1B-205ENST00000555543 TIMMDC1Q9NPL8 285 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 MID2Q9UJV3 735 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 NPIPA1Q9UND3 350 aa18.97■□□□□ 0.63
VTI1B-205ENST00000555543 NBPF19A0A087WUL8 3843 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 CCDC151A5D8V7 595 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 PINLYPA6NC86 204 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 CYSRT1A8MQ03 144 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 ERAL1O75616 437 aaKnown RBP18.96■□□□□ 0.63
VTI1B-205ENST00000555543 IL3P08700 152 aa18.96■□□□□ 0.63
VTI1B-205ENST00000555543 PORP16435 677 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms