RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 OR1L3Q8NH93 324 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 MAGEC3Q8TD91 643 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 DENND1AQ8TEH3 1009 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 CT55Q8WUE5 264 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 APOBEC4Q8WW27 367 aaKnown RBP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 STARD8Q92502 1023 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 STAMBPL1Q96FJ0 436 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 WDYHV1Q96HA8 205 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 FAR2Q96K12 515 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 PPM1MQ96MI6 270 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 GBP5Q96PP8 586 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 EBNA1BP2Q99848 306 aaKnown RBP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 C17orf62Q9BQA9 187 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 DUSP26Q9BV47 211 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 SLC26A1Q9H2B4 701 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 PLAC1Q9HBJ0 212 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 SEPSECSQ9HD40 501 aaKnown RBP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 FAM60AQ9NP50 221 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 SPHK1Q9NYA1 384 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 SPATA7Q9P0W8 599 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 ANKMY1Q9P2S6 941 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 LPAR3Q9UBY5 353 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 C19orf53Q9UNZ5 99 aaPredicted RBP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 PLCL2Q9UPR0 1127 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 FARSAQ9Y285 508 aaKnown RBP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 UBE2J1Q9Y385 318 aaPredicted RBP3.94□□□□□ -1.78
CPSF2-204ENST00000555244 DHRS7Q9Y394 339 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 MAST4O15021 2626 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 ANKRD12Q6UB98 2062 aa3.94□□□□□ -1.78
CPSF2-204ENST00000555244 HECTD1Q9ULT8 2610 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 MED13Q9UHV7 2174 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 FER1L5A0AVI2 2057 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 IGLV3-12A0A075B6K2 115 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 A0A087X1B8 175 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 GSAPA4D1B5 854 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 OR2A25A4D2G3 310 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 VSTM2BA6NLU5 285 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 EIF4E1BA6NMX2 242 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 E7EQ34 232 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 NDC80O14777 642 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 SLC16A5O15375 505 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 CTIFO43310 598 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ZNF749O43361 778 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 HCRTR1O43613 425 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 SNRNP200O75643 2136 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 PRB1P04280 392 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 TMIGD3P0DMS9 266 aaPredicted RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 PGAM1P18669 254 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 DRD4P21917 467 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 DLSTP36957 453 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 DIO1P49895 249 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ARSFP54793 590 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 RPS15P62841 145 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 CYP4F2P78329 520 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ABATP80404 500 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 PRDX1Q06830 199 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 DHX34Q14147 1143 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 LY6DQ14210 128 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 CRYMQ14894 314 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 NCF4Q15080 339 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 TMED2Q15363 201 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 PRTGQ2VWP7 1150 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 BTBD16Q32M84 506 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 TTLL9Q3SXZ7 439 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 SYTL3Q4VX76 610 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ACSBG2Q5FVE4 666 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 TCTE1Q5JU00 501 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 SPANXN3Q5MJ09 141 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 FAM90A2PQ658T7 463 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 STEAP4Q687X5 459 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 PTRHD1Q6GMV3 140 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ZNF425Q6IV72 752 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 LCN10Q6JVE6 187 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 LIN54Q6MZP7 749 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 LRRC8EQ6NSJ5 796 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 JMJD6Q6NYC1 403 aaPredicted RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 FBXO42Q6P3S6 717 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 TTC23LQ6PF05 361 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 FAM198BQ6UWH4 519 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 CES3Q6UWW8 571 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 LDB1Q86U70 411 aaPredicted RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 HPS6Q86YV9 775 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 KRT222Q8N1A0 295 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 OR9A1PQ8NGU1 263 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 OR6Y1Q8NGX8 325 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 SMPDL3AQ92484 453 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ANKRD7Q92527 254 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 INPP5DQ92835 1189 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 PDLIM5Q96HC4 596 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 REXO5Q96IC2 774 aaKnown RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 FOPNLQ96NB1 174 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 IP6K3Q96PC2 410 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 NRTNQ99748 197 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 HGH1Q9BTY7 390 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ACTL8Q9H568 366 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 XKR8Q9H6D3 395 aa3.93□□□□□ -1.78
CPSF2-204ENST00000555244 ACTR5Q9H9F9 607 aaPredicted RBP3.93□□□□□ -1.78
CPSF2-204ENST00000555244 FANCEQ9HB96 536 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms