RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 RDH12Q96NR8 316 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 NLNQ9BYT8 704 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 KLHL25Q9H0H3 589 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 PFDN1O60925 122 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 GMNNO75496 209 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 SNAP29O95721 258 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 PDGFBP01127 241 aaPredicted RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 COL6A3P12111 3177 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 GSTT1P30711 240 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 CHI3L1P36222 383 aaPredicted RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 CTSKP43235 329 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 RPS26P62854 115 aaKnown RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 FAHD1Q6P587 224 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 TMEFF1Q8IYR6 380 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 LGI4Q8N135 537 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 SLC25A45Q8N413 288 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 GPR32P1Q8NGA4 272 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 LMX1AQ8TE12 382 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 EPYCQ99645 322 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 AMBRA1Q9C0C7 1298 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 NDUFAF4Q9P032 175 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 SCOCQ9UIL1 159 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 PADI4Q9UM07 663 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 SH3GLB1Q9Y371 365 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 CLDN16Q9Y5I7 305 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 FITM1A5D6W6 292 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 EIF4E1BA6NMX2 242 aaKnown RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 G3V2T6 193 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 SEMA7AO75326 666 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 GUCY1B2O75343 617 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 MFN2O95140 757 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 NR2F6P10588 404 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 CCT3P49368 545 aaKnown RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 NCBP2P52298 156 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■■■□ 26
TDP1-210ENST00000554976 CFHR1Q03591 330 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 MGAT2Q10469 447 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 C14orf28Q4W4Y0 310 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 ZNF628Q5EBL2 1059 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 OR2T5Q6IEZ7 315 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 CEACAM20Q6UY09 585 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 USP53Q70EK8 1073 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 ABHD13Q7L211 337 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 METTL25Q8N6Q8 603 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 OR2T29Q8NH02 315 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 MOAP1Q96BY2 351 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 NRBF2Q96F24 287 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 CNBD2Q96M20 576 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 FUZQ9BT04 418 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 NPLQ9BXD5 320 aaPredicted RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 Q9H521 79 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 EPHA6Q9UF33 1036 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 KCND3Q9UK17 655 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 GPC6Q9Y625 555 aaPredicted RBP8.38□□□□□ -1.07
TDP1-210ENST00000554976 CSNK1G3Q9Y6M4 447 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 DMDP11532 3685 aa8.38□□□□□ -1.07
TDP1-210ENST00000554976 LY6G6EA0A0G2JKS1 128 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 ZNF682O95780 498 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 ZNF23P17027 643 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 SOAT1P35610 550 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 CAPGP40121 348 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 MAP3K8P41279 467 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 TGM3Q08188 693 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 SPIDRQ14159 915 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 PUM1Q14671 1186 aaKnown RBP eCLIP8.37□□□□□ -1.07
TDP1-210ENST00000554976 ZC3H12BQ5HYM0 836 aaKnown RBP8.37□□□□□ -1.07
TDP1-210ENST00000554976 C6orf132Q5T0Z8 1188 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 KDM4DQ6B0I6 523 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 LAIR2Q6ISS4 152 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 HEPHL1Q6MZM0 1159 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 OR2L13Q8N349 312 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 ELP4Q96EB1 424 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 FBXL20Q96IG2 436 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
TDP1-210ENST00000554976 PHF11Q9UIL8 331 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 RNF215Q9Y6U7 377 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 U3KQA8 63 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 H3BNH8 94 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 FOXS1O43638 330 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 DNAJB5O75953 348 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
TDP1-210ENST00000554976 C9P02748 559 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 ALOX12P18054 663 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 FUT4P22083 530 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 XCR1P46094 333 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 CSNK1EP49674 416 aaKnown RBP8.37□□□□□ -1.07
TDP1-210ENST00000554976 DAPP51397 102 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 HNRNPKP61978 463 aaKnown RBP eCLIP8.37□□□□□ -1.07
TDP1-210ENST00000554976 LSAMPQ13449 338 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 DEFB134Q4QY38 66 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 REEP3Q6NUK4 255 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 FAM111BQ6SJ93 734 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 CYP4Z1Q86W10 505 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 MAGEE2Q8TD90 523 aaPredicted RBP8.37□□□□□ -1.07
TDP1-210ENST00000554976 TMEM19Q96HH6 336 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 WFDC6Q9BQY6 131 aa8.37□□□□□ -1.07
TDP1-210ENST00000554976 OR51I1Q9H343 314 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms