RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SLC28A1O00337 649 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 GLUD1P00367 558 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 HBQ1P09105 142 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 PTPN6P29350 595 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 ACLYP53396 1101 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 CLLU1OSQ5K130 101 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 GLB1LQ6UWU2 654 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 C3P1Q6ZMU1 363 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 PTCHD4Q6ZW05 846 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 UXS1Q8NBZ7 420 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 SLC5A11Q8WWX8 675 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 TPD52L3Q96J77 140 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 H2AFJQ9BTM1 129 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 LRTM1Q9HBL6 345 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 RLIMQ9NVW2 624 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 NUP214P35658 2090 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 PDCD5O14737 125 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 SELENOFO60613 162 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 SGSHP51688 502 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 CYP4F8P98187 520 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 GPR17Q13304 367 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 SLC14A1Q13336 389 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 C1DQ13901 141 aaKnown RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 TEAD4Q15561 434 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 MEDAGQ5VYS4 303 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 PTRHD1Q6GMV3 140 aaKnown RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 TRIM46Q7Z4K8 759 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 STK40Q8N2I9 435 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 PLA2G15Q8NCC3 412 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 LKAAEAR1Q8TD35 194 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 POF1BQ8WVV4 589 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 MTFMTQ96DP5 389 aaKnown RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 NIPSNAP1Q9BPW8 284 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 BOCQ9BWV1 1114 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 APOL5Q9BWW9 433 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 SLAMF7Q9NQ25 335 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 DLL4Q9NR61 685 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 IL17CQ9P0M4 197 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 EXO1Q9UQ84 846 aaKnown RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 SMIM30A4D0T7 59 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 LOC730098B7Z3J9 87 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 AIPO00170 330 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 ADAMDEC1O15204 470 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 CBX7O95931 251 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 ZDHHC11BP0C7U3 371 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 SMSP52788 366 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 DCDC1P59894 354 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 CACNG1Q06432 222 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 OPCMLQ14982 345 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 USP39Q53GS9 565 aaKnown RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 C3orf38Q5JPI3 329 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 LINGO4Q6UY18 593 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 DBX2Q6ZNG2 339 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-203ENST00000554873 OR4A15Q8NGL6 344 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 EGFL8Q99944 293 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 POMT2Q9UKY4 750 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 MGAT4BQ9UQ53 548 aa14.89□□□□□ -0.03
SYNE3-203ENST00000554873 VNN2O95498 520 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 B3GALT4O96024 378 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 NMBP08949 121 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 BCKDHAP12694 445 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 S100A3P33764 101 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 CDKN2CP42773 168 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 VSX2P58304 361 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 MPEG1Q2M385 716 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 ARHGAP15Q53QZ3 475 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 ASPGQ86U10 573 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 FTMTQ8N4E7 242 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 CHCHD4Q8N4Q1 142 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 NANOGP1Q8N7R0 232 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PROKR2Q8NFJ6 384 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 OR52P1PQ8NH57 321 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 HDHD2Q9H0R4 259 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 SLC25A19Q9HC21 320 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 NDRG3Q9UGV2 375 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 MLXQ9UH92 298 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PURGQ9UJV8 347 aaKnown RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 HCN2Q9UL51 889 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PLCL2Q9UPR0 1127 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 ZFR2Q9UPR6 939 aaKnown RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PADI2Q9Y2J8 665 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 OARD1Q9Y530 152 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 TMEM189-UBE2V1I3L0A0 370 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 MANBAO00462 879 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 CASC3O15234 703 aaKnown RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 CD160O95971 181 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 RHOCP08134 193 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 KCNJ10P78508 379 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 NCF4Q15080 339 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PDSS1Q5T2R2 415 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 HSD17B13Q7Z5P4 300 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 ANKRD46Q86W74 232 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 CLDN19Q8N6F1 224 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 SCRN2Q96FV2 425 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 FAM126AQ9BYI3 521 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 SPATA6Q9NWH7 488 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 ASIC5Q9NY37 505 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 CTSFQ9UBX1 484 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PCDHB1Q9Y5F3 818 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms